CGEN
An R package for analysis of case-control studies in genetic epidemiology
Bioconductor version: 3.24 · Package version: 3.49.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
This is a package for analysis of case-control data in genetic epidemiology. It provides a set of statistical methods for evaluating gene-environment (or gene-genes) interactions under multiplicative and additive risk models, with or without assuming gene-environment (or gene-gene) independence in the underlying population.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("CGEN")Details
| Maintainer | Justin Lee <jhylee@stanford.edu> |
| Author | Samsiddhi Bhattacharjee [aut], Nilanjan Chatterjee [aut], Summer Han [aut], Minsun Song [aut], William Wheeler [aut], Matthieu de Rochemonteix [aut], Nilotpal Sanyal [aut], Justin Lee [cre] |
| License | GPL-2 + file LICENSE |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Clustering, MultipleComparison, SNP, Software |
| Package Short Url | https://bioconductor.org/packages/CGEN/ |
Citation
From within R, enter citation("CGEN"):
Samsiddhi Bhattacharjee, Nilanjan Chatterjee, Summer Han, Minsun Song, William Wheeler, Matthieu de Rochemonteix, Nilotpal Sanyal. CGEN: An R package for analysis of case-control studies in genetic epidemiology. doi:10.18129/B9.bioc.CGEN, R package version 3.49.0, https://bioconductor.org/packages/CGEN.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | CGEN_3.49.0.tar.gz |
| Windows binary (x86_64) | CGEN_3.49.0.zip |
| macOS binary (arm64) | CGEN_3.49.0.tgz |
| macOS binary (x86_64) | CGEN_3.49.0.tgz |