DelayedDataFrame

DOI: 10.18129/B9.bioc.DelayedDataFrame    

This is the development version of DelayedDataFrame; to use it, please install the devel version of Bioconductor.

Delayed operation on DataFrame using standard DataFrame metaphor

Bioconductor version: Development (3.9)

Based on the standard DataFrame metaphor, we are trying to implement the feature of delayed operation on the DelayedDataFrame, with a slot of lazyIndex, which saves the mapping indexes for each column of DelayedDataFrame. Methods like show, validity check, [/[[ subsetting, rbind/cbind are implemented for DelayedDataFrame to be operated around lazyIndex. The listData slot stays untouched until a realization call e.g., DataFrame constructor OR as.list() is invoked.

Author: Qian Liu [aut, cre], Hervé Pagès [ctb], Martin Morgan [ctb]

Maintainer: Qian Liu <Qian.Liu at roswellpark.org>

Citation (from within R, enter citation("DelayedDataFrame")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("DelayedDataFrame", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DelayedDataFrame")

 

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Details

biocViews DataRepresentation, Infrastructure, Software
Version 0.99.9
License GPL-3
Depends R (>= 3.5), S4Vectors(>= 0.19.12), DelayedArray(>= 0.7.5)
Imports methods, stats, BiocGenerics
LinkingTo
Suggests testthat, knitr, rmarkdown, SeqArray, GDSArray
SystemRequirements
Enhances
URL https://github.com/Bioconductor/DelayedDataFrame
BugReports https://github.com/Bioconductor/DelayedDataFrame/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package DelayedDataFrame_0.99.9.tar.gz
Windows Binary DelayedDataFrame_0.99.9.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) DelayedDataFrame_0.99.9.tgz
Source Repository git clone https://git.bioconductor.org/packages/DelayedDataFrame
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/DelayedDataFrame
Package Short Url http://bioconductor.org/packages/DelayedDataFrame/
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