FELLA
This is the development version of FELLA; for the stable release version, see FELLA.
All Bioconductor versions of FELLA
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7
Interpretation and enrichment for metabolomics data
Bioconductor version: 3.24 · Package version: 1.33.0
Enrichment of metabolomics data using KEGG entries. Given a set of affected compounds, FELLA suggests affected reactions, enzymes, modules and pathways using label propagation in a knowledge model network. The resulting subnetwork can be visualised and exported.
Author: Sergio Picart-Armada [aut, cre], Francesc Fernandez-Albert [aut], Alexandre Perera-Lluna [aut]
Maintainer: Sergio Picart-Armada <sergi.picart at upc.edu>
Citation
From within R, enter citation("FELLA"):
Sergio Picart-Armada, Francesc Fernandez-Albert, Alexandre Perera-Lluna. FELLA: Interpretation and enrichment for metabolomics data. doi:10.18129/B9.bioc.FELLA, R package version 1.33.0, https://bioconductor.org/packages/FELLA.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("FELLA")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.33.0 |
| License | GPL-3 |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.7 (R-3.5) (8 years) |
| Downloads rank | 622 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | GO, GraphAndNetwork, KEGG, Metabolomics, Network, NetworkEnrichment, Pathways, Software |
| Package Short Url | https://bioconductor.org/packages/FELLA/ |
Documentation
| Reference Manual | |
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | FELLA_1.33.0.tar.gz |
| Windows binary (x86_64) | FELLA_1.33.0.zip |
| macOS binary (arm64) | FELLA_1.33.0.tgz |
| macOS binary (x86_64) | FELLA_1.33.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/FELLA |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/FELLA |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 3.5.0)
Imports: methods, igraph, Matrix, KEGGREST, plyr, stats, graphics, utils
Suggests: shiny, DT, magrittr, visNetwork, knitr, BiocStyle, rmarkdown, testthat, biomaRt, org.Hs.eg.db, org.Mm.eg.db, AnnotationDbi, GOSemSim