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KCsmart

This is the development version of KCsmart; for the stable release version, see KCsmart.

Multi sample aCGH analysis package using kernel convolution


Bioconductor version: Development (3.19)

Multi sample aCGH analysis package using kernel convolution

Author: Jorma de Ronde, Christiaan Klijn, Arno Velds

Maintainer: Jorma de Ronde <j.d.ronde at nki.nl>

Citation (from within R, enter citation("KCsmart")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("KCsmart")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("KCsmart")
KCsmart example session PDF R Script
Reference Manual PDF

Details

biocViews CopyNumberVariation, Microarray, Software, Visualization, aCGH
Version 2.61.0
In Bioconductor since BioC 2.3 (R-2.8) (15.5 years)
License GPL-3
Depends siggenes, multtest, KernSmooth
Imports methods, BiocGenerics
System Requirements
URL
See More
Suggests
Linking To
Enhances Biobase, CGHbase
Depends On Me
Imports Me
Suggests Me
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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package KCsmart_2.61.0.tar.gz
Windows Binary KCsmart_2.61.0.zip
macOS Binary (x86_64) KCsmart_2.61.0.tgz
macOS Binary (arm64) KCsmart_2.61.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/KCsmart
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/KCsmart
Bioc Package Browser https://code.bioconductor.org/browse/KCsmart/
Package Short Url https://bioconductor.org/packages/KCsmart/
Package Downloads Report Download Stats