DOI: 10.18129/B9.bioc.KCsmart    

This is the development version of KCsmart; for the stable release version, see KCsmart.

Multi sample aCGH analysis package using kernel convolution

Bioconductor version: Development (3.9)

Multi sample aCGH analysis package using kernel convolution

Author: Jorma de Ronde, Christiaan Klijn, Arno Velds

Maintainer: Jorma de Ronde <j.d.ronde at nki.nl>

Citation (from within R, enter citation("KCsmart")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("KCsmart", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script KCsmart example session
PDF   Reference Manual


biocViews CopyNumberVariation, Microarray, Software, Visualization, aCGH
Version 2.41.0
In Bioconductor since BioC 2.3 (R-2.8) (10.5 years)
License GPL-3
Depends siggenes, multtest, KernSmooth
Imports methods, BiocGenerics
Enhances Biobase, CGHbase
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package KCsmart_2.41.0.tar.gz
Windows Binary KCsmart_2.41.0.zip
Mac OS X 10.11 (El Capitan) KCsmart_2.41.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/KCsmart
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/KCsmart
Package Short Url http://bioconductor.org/packages/KCsmart/
Package Downloads Report Download Stats

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