MetID
Network-based prioritization of putative metabolite IDs
Bioconductor version: 3.24 · Package version: 1.31.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
This package uses an innovative network-based approach that will enhance our ability to determine the identities of significant ions detected by LC-MS.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MetID")Details
| Maintainer | Zhenzhi Li <zzrickli@gmail.com> |
| Author | Zhenzhi Li <zzrickli@gmail.com> |
| License | Artistic-2.0 |
| URL | https://github.com/ressomlab/MetID |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | AssayDomain, BiologicalQuestion, Infrastructure, KEGG, Network, ResearchField, Software, StatisticalMethod, Technology, WorkflowStep |
| Package Short Url | https://bioconductor.org/packages/MetID/ |
Citation
From within R, enter citation("MetID"):
Zhenzhi Li. MetID: Network-based prioritization of putative metabolite IDs. doi:10.18129/B9.bioc.MetID, R package version 1.31.0, https://bioconductor.org/packages/MetID.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | MetID_1.31.0.tar.gz |
| Windows binary (x86_64) | MetID_1.31.0.zip |
| macOS binary (arm64) | MetID_1.31.0.tgz |
| macOS binary (x86_64) | MetID_1.31.0.tgz |
Dependencies
Depends: R (>= 3.5)
Imports: utils (>= 3.3.1), stats (>= 3.4.2), devtools (>= 1.13.0), stringr (>= 1.3.0), Matrix (>= 1.2-12), igraph (>= 1.2.1), ChemmineR (>= 2.30.2)
Suggests: knitr (>= 1.19), rmarkdown (>= 1.8)