DOI: 10.18129/B9.bioc.MiChip    

This is the development version of MiChip; for the stable release version, see MiChip.

MiChip Parsing and Summarizing Functions

Bioconductor version: Development (3.9)

This package takes the MiChip miRNA microarray .grp scanner output files and parses these out, providing summary and plotting functions to analyse MiChip hybridizations. A set of hybridizations is packaged into an ExpressionSet allowing it to be used by other BioConductor packages.

Author: Jonathon Blake <blake at embl.de>

Maintainer: Jonathon Blake <blake at embl.de>

Citation (from within R, enter citation("MiChip")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("MiChip", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script MiChip miRNA Microarray Processing
PDF   Reference Manual


biocViews Microarray, Preprocessing, Software
Version 1.37.0
In Bioconductor since BioC 3.8 (R-3.5) (< 6 months)
License GPL (>= 2)
Depends R (>= 2.3.0), Biobase
Imports Biobase
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MiChip_1.37.0.tar.gz
Windows Binary MiChip_1.37.0.zip
Mac OS X 10.11 (El Capitan) MiChip_1.37.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MiChip
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MiChip
Package Short Url http://bioconductor.org/packages/MiChip/
Package Downloads Report Download Stats

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