MouseFM
This is the development version of MouseFM; for the stable release version, see MouseFM.
All Bioconductor versions of MouseFM
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12
In-silico methods for genetic finemapping in inbred mice
Bioconductor version: 3.24 · Package version: 1.23.0
This package provides methods for genetic finemapping in inbred mice by taking advantage of their very high homozygosity rate (>95%).
Author: Matthias Munz [aut, cre] 
, Inken Wohlers [aut] , Hauke Busch [aut]
Maintainer: Matthias Munz <matthias.munz at gmx.de>
Citation
From within R, enter citation("MouseFM"):
Matthias Munz, Inken Wohlers, Hauke Busch. MouseFM: In-silico methods for genetic finemapping in inbred mice. doi:10.18129/B9.bioc.MouseFM, R package version 1.23.0, https://bioconductor.org/packages/MouseFM.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("MouseFM")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.23.0 |
| License | GPL-3 |
| Bug Reports | https://github.com/matmu/MouseFM/issues |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.12 (R-4.0) (5 years) |
| Downloads rank | 1724 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | BiomedicalInformatics, FunctionalGenomics, GenePrediction, GeneTarget, Genetics, GenomicVariation, MathematicalBiology, MultipleComparison, PatternLogic, SNP, Software, SystemsBiology, VariantAnnotation |
| Package Short Url | https://bioconductor.org/packages/MouseFM/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MouseFM")| Fetch homozygous genotypes of inbred mouse strains | HTML | R Script |
| Finemapping of genetic regions in inbred mice | HTML | R Script |
| Prioritization of inbred mouse strains for resolving genetic regions | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | MouseFM_1.23.0.tar.gz |
| Windows binary (x86_64) | MouseFM_1.23.0.zip |
| macOS binary (arm64) | MouseFM_1.23.0.tgz |
| macOS binary (x86_64) | MouseFM_1.23.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/MouseFM |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/MouseFM |
| Package Downloads Report | Download Stats |