DOI: 10.18129/B9.bioc.Pviz    

This is the development version of Pviz; for the stable release version, see Pviz.

Peptide Annotation and Data Visualization using Gviz

Bioconductor version: Development (3.9)

Pviz adapts the Gviz package for protein sequences and data.

Author: Renan Sauteraud, Mike Jiang, Raphael Gottardo

Maintainer: Renan Sauteraud <rsautera at fhcrc.org>

Citation (from within R, enter citation("Pviz")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("Pviz", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script The Pviz users guide
PDF   Reference Manual


biocViews Microarray, Proteomics, Software, Visualization
Version 1.17.0
In Bioconductor since BioC 3.0 (R-3.1) (4.5 years)
License Artistic-2.0
Depends R (>= 3.0.0), Gviz(>= 1.7.10)
Imports biovizBase, Biostrings, GenomicRanges, IRanges, data.table, methods
Suggests knitr, pepDat
Depends On Me
Imports Me Pbase
Suggests Me pepStat
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Pviz_1.17.0.tar.gz
Windows Binary Pviz_1.17.0.zip
Mac OS X 10.11 (El Capitan) Pviz_1.17.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Pviz
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Pviz
Package Short Url http://bioconductor.org/packages/Pviz/
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