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This is the development version of Rcpi; for the stable release version, see Rcpi.

Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery

Bioconductor version: Development (3.19)

A molecular informatics toolkit with an integration of bioinformatics and chemoinformatics tools for drug discovery.

Author: Nan Xiao [aut, cre], Dong-Sheng Cao [aut], Qing-Song Xu [aut]

Maintainer: Nan Xiao <me at nanx.me>

Citation (from within R, enter citation("Rcpi")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Rcpi Quick Reference Card HTML
Rcpi: R/Bioconductor Package as an Integrated Informatics Platform for Drug Discovery HTML R Script
Reference Manual PDF


biocViews BiomedicalInformatics, Cheminformatics, DataImport, DataRepresentation, FeatureExtraction, GO, Proteomics, Software, SystemsBiology
Version 1.39.0
In Bioconductor since BioC 2.14 (R-3.1) (10 years)
License Artistic-2.0 | file LICENSE
Depends R (>= 3.0.2)
Imports Biostrings, GOSemSim, RCurl, doParallel, foreach, methods, rjson, rlang, stats, utils
System Requirements
URL https://nanx.me/Rcpi/ https://github.com/nanxstats/Rcpi
Bug Reports https://github.com/nanxstats/Rcpi/issues
See More
Suggests knitr, rmarkdown, testthat (>= 3.0.0)
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Depends On Me
Imports Me proteasy
Suggests Me
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rcpi_1.39.0.tar.gz
Windows Binary Rcpi_1.39.0.zip
macOS Binary (x86_64) Rcpi_1.39.0.tgz
macOS Binary (arm64) Rcpi_1.39.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Rcpi
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rcpi
Bioc Package Browser https://code.bioconductor.org/browse/Rcpi/
Package Short Url https://bioconductor.org/packages/Rcpi/
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