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SharedObject

This is the development version of SharedObject; for the stable release version, see SharedObject.

Sharing R objects across multiple R processes without memory duplication


Bioconductor version: Development (3.20)

This package is developed for facilitating parallel computing in R. It is capable to create an R object in the shared memory space and share the data across multiple R processes. It avoids the overhead of memory dulplication and data transfer, which make sharing big data object across many clusters possible.

Author: Jiefei Wang [aut, cre], Martin Morgan [aut]

Maintainer: Jiefei Wang <szwjf08 at gmail.com>

Citation (from within R, enter citation("SharedObject")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("SharedObject")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SharedObject")
quickStart HTML R Script
quickStartChinese HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews Infrastructure, Software
Version 1.19.1
In Bioconductor since BioC 3.10 (R-3.6) (4.5 years)
License GPL-3
Depends R (>= 3.6.0)
Imports Rcpp, methods, stats, BiocGenerics
System Requirements GNU make, C++11
URL
Bug Reports https://github.com/Jiefei-Wang/SharedObject/issues
See More
Suggests testthat, parallel, knitr, rmarkdown, BiocStyle
Linking To BH, Rcpp
Enhances
Depends On Me
Imports Me NewWave
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SharedObject_1.19.1.tar.gz
Windows Binary SharedObject_1.19.1.zip (64-bit only)
macOS Binary (x86_64) SharedObject_1.19.1.tgz
macOS Binary (arm64) SharedObject_1.19.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/SharedObject
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SharedObject
Bioc Package Browser https://code.bioconductor.org/browse/SharedObject/
Package Short Url https://bioconductor.org/packages/SharedObject/
Package Downloads Report Download Stats