DOI: 10.18129/B9.bioc.XVector    

This is the development version of XVector; for the stable release version, see XVector.

Representation and manipulation of external sequences

Bioconductor version: Development (3.7)

Memory efficient S4 classes for storing sequences "externally" (behind an R external pointer, or on disk).

Author: Hervé Pagès and Patrick Aboyoun

Maintainer: Hervé Pagès <hpages at fredhutch.org>

Citation (from within R, enter citation("XVector")):


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biocViews DataRepresentation, Infrastructure, Software
Version 0.19.9
In Bioconductor since BioC 2.13 (R-3.0) (4.5 years)
License Artistic-2.0
Depends R (>= 2.8.0), methods, BiocGenerics(>= 0.19.2), S4Vectors(>= 0.17.24), IRanges(>= 2.13.16)
Imports methods, utils, zlibbioc, BiocGenerics, S4Vectors, IRanges
LinkingTo S4Vectors, IRanges
Suggests Biostrings, drosophila2probe, RUnit
Depends On Me Biostrings, motifRG, triplex
Imports Me BSgenome, ChIPsim, CNEr, compEpiTools, DECIPHER, gcrma, GenomicFeatures, GenomicRanges, Gviz, IONiseR, kebabs, MatrixRider, motifRG, R453Plus1Toolbox, Rsamtools, rtracklayer, TFBSTools, tracktables, VariantAnnotation
Suggests Me IRanges
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Source Package XVector_0.19.9.tar.gz
Windows Binary XVector_0.19.9.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) XVector_0.19.9.tgz
Source Repository git clone https://git.bioconductor.org/packages/XVector
Package Short Url http://bioconductor.org/packages/XVector/
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