bgx

This is the development version of bgx; for the stable release version, see bgx.

Bayesian Gene eXpression

Bioconductor version: Development (3.19)

Bayesian integrated analysis of Affymetrix GeneChips

Author: Ernest Turro, Graeme Ambler, Anne-Mette K Hein

Maintainer: Ernest Turro <et341 at cam.ac.uk>

Citation (from within R, enter citation("bgx")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("bgx")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("bgx")

HowTo BGX	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	DifferentialExpression, Microarray, Software
Version	1.69.3
In Bioconductor since	BioC 2.0 (R-2.5) (17 years)
License	GPL-2
Depends	R (>= 2.0.1), Biobase, affy(>= 1.5.0), gcrma(>= 2.4.1)
Imports	Rcpp (>= 0.11.0)
System Requirements
URL

Suggests	affydata, hgu95av2cdf
Linking To	Rcpp
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	bgx_1.69.3.tar.gz
Windows Binary
macOS Binary (x86_64)	bgx_1.69.3.tgz
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/bgx
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/bgx
Bioc Package Browser	https://code.bioconductor.org/browse/bgx/
Package Short Url	https://bioconductor.org/packages/bgx/
Package Downloads Report	Download Stats