consensus
This is the development version of consensus; for the stable release version, see consensus.
All Bioconductor versions of consensus
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8
Cross-platform consensus analysis of genomic measurements via interlaboratory testing method
Bioconductor version: 3.24 · Package version: 1.31.0
An implementation of the American Society for Testing and Materials (ASTM) Standard E691 for interlaboratory testing procedures, designed for cross-platform genomic measurements. Given three (3) or more genomic platforms or laboratory protocols, this package provides interlaboratory testing procedures giving per-locus comparisons for sensitivity and precision between platforms.
Author: Tim Peters
Maintainer: Tim Peters <t.peters at garvan.org.au>
Citation
From within R, enter citation("consensus"):
Tim Peters. consensus: Cross-platform consensus analysis of genomic measurements via interlaboratory testing method. doi:10.18129/B9.bioc.consensus, R package version 1.31.0, https://bioconductor.org/packages/consensus.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("consensus")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.31.0 |
| License | BSD_3_clause + file LICENSE |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.8 (R-3.5) (7 years) |
| Downloads rank | 1716 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | DataRepresentation, GeneExpression, Microarray, QualityControl, RNASeq, Regression, Software |
| Package Short Url | https://bioconductor.org/packages/consensus/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("consensus")| Fitting and visualising row-linear models with \texttt{consensus} | R Script | |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | consensus_1.31.0.tar.gz |
| Windows binary (x86_64) | consensus_1.31.0.zip |
| macOS binary (arm64) | consensus_1.31.0.tgz |
| macOS binary (x86_64) | consensus_1.31.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/consensus |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/consensus |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 3.5), RColorBrewer
Imports: matrixStats, gplots, grDevices, methods, graphics, stats, utils
Suggests: knitr, RUnit, rmarkdown, BiocGenerics