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factDesign

Factorial designed microarray experiment analysis

Bioconductor version: 3.24 · Package version: 1.89.0

Other Bioconductor versions

devel is the development version; release is the current stable one.

3.24 (devel), 3.23 (release)

This package provides a set of tools for analyzing data from a factorial designed microarray experiment, or any microarray experiment for which a linear model is appropriate. The functions can be used to evaluate tests of contrast of biological interest and perform single outlier detection.

DOI: 10.18129/B9.bioc.factDesign

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("factDesign")

Details

MaintainerDenise Scholtens <dscholtens@northwestern.edu>
AuthorDenise Scholtens
LicenseLGPL
Source branchdevel
Build report Bioconductor build system, r-universe
biocViewsDifferentialExpression, Microarray, Software
Package Short Url https://bioconductor.org/packages/factDesign/

Citation

From within R, enter citation("factDesign"):

Denise Scholtens. factDesign: Factorial designed microarray experiment analysis. doi:10.18129/B9.bioc.factDesign, R package version 1.89.0, https://bioconductor.org/packages/factDesign.

Generated from the package metadata; it may differ from the package's own citation.

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packagefactDesign_1.89.0.tar.gz
Windows binary (x86_64)factDesign_1.89.0.zip
macOS binary (arm64)factDesign_1.89.0.tgz
macOS binary (x86_64)factDesign_1.89.0.tgz
Dependencies

Depends: Biobase (>= 2.5.5)

Imports: stats

Suggests: affy, genefilter, multtest