Bioconductor Developer Survey 2026 Now Open!

ggtreeDendro

This is the development version of ggtreeDendro; for the stable release version, see ggtreeDendro.

All Bioconductor versions of ggtreeDendro

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16

Drawing 'dendrogram' using 'ggtree'

Bioconductor version: 3.24 · Package version: 1.15.0

Offers a set of 'autoplot' methods to visualize tree-like structures (e.g., hierarchical clustering and classification/regression trees) using 'ggtree'. You can adjust graphical parameters using grammar of graphic syntax and integrate external data to the tree.

Author: Guangchuang Yu [aut, cre, cph] ORCID iD ORCID: 0000-0002-6485-8781 , Shuangbin Xu [ctb] ORCID iD ORCID: 0000-0003-3513-5362 , Chuanjie Zhang [ctb]

Maintainer: Guangchuang Yu <guangchuangyu at gmail.com>

DOI: 10.18129/B9.bioc.ggtreeDendro

Citation

From within R, enter citation("ggtreeDendro"):

Guangchuang Yu. ggtreeDendro: Drawing 'dendrogram' using 'ggtree'. doi:10.18129/B9.bioc.ggtreeDendro, R package version 1.15.0, https://bioconductor.org/packages/ggtreeDendro.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("ggtreeDendro")

For older versions of R, please refer to the appropriate Bioconductor release.

Details

Version1.15.0
LicenseArtistic-2.0
Last updated2026-04-28
In Bioconductor sinceBioC 3.16 (R-4.2) (3 years)
Downloads rank2112 of 2,456
Source branchdevel
Build report Bioconductor build system, r-universe
biocViewsClassification, Clustering, DecisionTree, Phylogenetics, Software, Visualization
Package Short Url https://bioconductor.org/packages/ggtreeDendro/

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ggtreeDendro")
Visualizing Dendrogram using ggtree HTML R Script
Reference ManualPDF
NEWSText

Download

Follow the installation instructions to use this package in your R session.

Source packageggtreeDendro_1.15.0.tar.gz
Windows binary (x86_64)ggtreeDendro_1.15.0.zip
macOS binary (arm64)ggtreeDendro_1.15.0.tgz
macOS binary (x86_64)ggtreeDendro_1.15.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/ggtreeDendro
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/ggtreeDendro
Package Downloads ReportDownload Stats
Dependencies

Depends: ggtree (>= 3.5.3)

Imports: ggplot2, stats, tidytree, utils

Suggests: aplot, cluster, knitr, MASS, mdendro, prettydoc, pvclust, rmarkdown, testthat (>= 3.0.0), treeio, yulab.utils