iASeq
This is the development version of iASeq; for the stable release version, see iASeq.
All Bioconductor versions of iASeq
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10
iASeq: integrating multiple sequencing datasets for detecting allele-specific events
Bioconductor version: 3.24 · Package version: 1.57.0
It fits correlation motif model to multiple RNAseq or ChIPseq studies to improve detection of allele-specific events and describe correlation patterns across studies.
Author: Yingying Wei, Hongkai Ji
Maintainer: Yingying Wei <ywei at jhsph.edu>
Citation
From within R, enter citation("iASeq"):
Yingying Wei, Hongkai Ji. iASeq: iASeq: integrating multiple sequencing datasets for detecting allele-specific events. doi:10.18129/B9.bioc.iASeq, R package version 1.57.0, https://bioconductor.org/packages/iASeq.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("iASeq")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.57.0 |
| License | GPL-2 |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 2.10 (R-2.15) (14 years) |
| Downloads rank | 1991 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | ChIPSeq, ImmunoOncology, RNASeq, SNP, Software |
| Package Short Url | https://bioconductor.org/packages/iASeq/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("iASeq")| iASeq Vignette | R Script | |
| Reference Manual |
Download
Follow the installation instructions to use this package in your R session.
| Source package | iASeq_1.57.0.tar.gz |
| Windows binary (x86_64) | iASeq_1.57.0.zip |
| macOS binary (arm64) | iASeq_1.57.0.tgz |
| macOS binary (x86_64) | iASeq_1.57.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/iASeq |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/iASeq |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 2.14.1)
Imports: graphics, grDevices