DOI: 10.18129/B9.bioc.miRmine    

This is the development version of miRmine; for the stable release version, see miRmine.

Data package with miRNA-seq datasets from miRmine database as RangedSummarizedExperiment

Bioconductor version: Development (3.9)

miRmine database is a collection of expression profiles from different publicly available miRNA-seq datasets, Panwar et al (2017) miRmine: A Database of Human miRNA Expression, prepared with this data package as RangedSummarizedExperiment.

Author: Dusan Randjelovic [aut, cre]

Maintainer: Dusan Randjelovic <dusan.randjelovic at sbgenomics.com>

Citation (from within R, enter citation("miRmine")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("miRmine", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



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biocViews ExpressionData, Homo_sapiens_Data, RNASeqData, SequencingData, Software
Version 1.5.0
In Bioconductor since BioC 3.6 (R-3.4) (1.5 years)
License GPL (>= 3)
Depends R (>= 3.4), SummarizedExperiment
Suggests BiocStyle, knitr, rmarkdown, DESeq2
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

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Follow Installation instructions to use this package in your R session.

Source Package miRmine_1.5.0.tar.gz
Windows Binary miRmine_1.5.0.zip
Mac OS X 10.11 (El Capitan) miRmine_1.5.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/miRmine
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/miRmine
Package Short Url http://bioconductor.org/packages/miRmine/
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