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normScore

This is the development version of normScore; to use it, please install the devel version of Bioconductor.

Evaluation and Ranking of Normalization Methods for Proteomics Data

Bioconductor version: 3.24 · Package version: 0.99.1

Provides tools to evaluate and rank normalization methods for omics datasets using a composite score derived from multiple performance metrics. The package is designed to support systematic benchmarking and comparison of normalization strategies across datasets and experimental settings. It also includes utilities for summarizing results and visualizing normalization performance.

Author: Julia García Currás [aut, cre] ORCID iD ORCID: 0009-0002-6354-5035 , Axencia Galega de Innovación (GAIN), Xunta de Galicia [fnd] (Industrial Doctorate Grant 2022-2026, Ref. 23_IN606D_2022_2707220)

Maintainer: Julia García Currás <julia.gcurras at udc.es>

DOI: 10.18129/B9.bioc.normScore

Citation

From within R, enter citation("normScore"):

Julia García Currás. normScore: Evaluation and Ranking of Normalization Methods for Proteomics Data. doi:10.18129/B9.bioc.normScore, R package version 0.99.1, https://bioconductor.org/packages/normScore.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("normScore")

For older versions of R, please refer to the appropriate Bioconductor release.

Details

Version0.99.1
LicenseGPL-2
URLhttps://github.com/juliagcurras/normScore https://juliagcurras.github.io/normScore/
Bug Reportshttps://https://github.com/juliagcurras/normScore/issues
Last updated2026-08-25
In Bioconductor sinceBioC 3.24 (R-4.6)
Downloads rank2439 of 2,456
Source branchdevel
Build report Bioconductor build system, r-universe
biocViewsMultipleComparison, Normalization, Preprocessing, Proteomics, QualityControl, Software
Package Short Url https://bioconductor.org/packages/normScore/

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("normScore")
Getting started with normScore HTML R Script
Reference ManualPDF
NEWSText

Download

Follow the installation instructions to use this package in your R session.

Source packagenormScore_0.99.1.tar.gz
Windows binary (x86_64)normScore_0.99.1.zip
macOS binary (arm64)normScore_0.99.1.tgz
macOS binary (x86_64)normScore_0.99.1.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/normScore
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/normScore
Package Downloads ReportDownload Stats
Dependencies

Depends: R (>= 4.5)

Imports: stats, ggplot2, ggpubr, boot, MASS, rlang, withr

Suggests: knitr, rmarkdown, testthat (>= 3.0.0), limma, NormalyzerDE, SummarizedExperiment, S4Vectors, methods, BiocStyle, BiocManager