onlineFDR

DOI: 10.18129/B9.bioc.onlineFDR    

This is the development version of onlineFDR; for the stable release version, see onlineFDR.

Online error control

Bioconductor version: Development (3.11)

This package allows users to control the false discovery rate (FDR) or familywise error rate (FWER) for online hypothesis testing, where hypotheses arrive sequentially in a stream. In this framework, a null hypothesis is rejected based only on the previous decisions, as the future p-values and the number of hypotheses to be tested are unknown.

Author: David S. Robertson [aut, cre], Aaditya Ramdas [aut], Adel Javanmard [aut], Andrea Montanari [aut], Jinjin Tian [aut], Tijana Zrnic [aut], Natasha A. Karp [aut]

Maintainer: David S. Robertson <david.robertson at mrc-bsu.cam.ac.uk>

Citation (from within R, enter citation("onlineFDR")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("onlineFDR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("onlineFDR")

 

HTML R Script Using the onlineFDR package
PDF   Reference Manual
Text   NEWS

Details

biocViews MultipleComparison, Software, StatisticalMethod
Version 1.5.0
In Bioconductor since BioC 3.8 (R-3.5) (1 year)
License GPL-3
Depends
Imports stats
LinkingTo
Suggests knitr, rmarkdown, testthat, covr
SystemRequirements
Enhances
URL https://dsrobertson.github.io/onlineFDR/index.html
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package onlineFDR_1.5.0.tar.gz
Windows Binary onlineFDR_1.5.0.zip
Mac OS X 10.11 (El Capitan) onlineFDR_1.5.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/onlineFDR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/onlineFDR
Package Short Url https://bioconductor.org/packages/onlineFDR/
Package Downloads Report Download Stats

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