optimalFlow
optimalFlow
Bioconductor version: 3.24 · Package version: 1.25.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Optimal-transport techniques applied to supervised flow cytometry gating.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("optimalFlow")Details
| Maintainer | Hristo Inouzhe <hristo.inouzhe@gmail.com> |
| Author | Hristo Inouzhe <hristo.inouzhe@gmail.com> |
| License | Artistic-2.0 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | FlowCytometry, Software, Technology |
| Package Short Url | https://bioconductor.org/packages/optimalFlow/ |
Citation
From within R, enter citation("optimalFlow"):
Hristo Inouzhe. optimalFlow: optimalFlow. doi:10.18129/B9.bioc.optimalFlow, R package version 1.25.0, https://bioconductor.org/packages/optimalFlow.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | optimalFlow_1.25.0.tar.gz |
| Windows binary (x86_64) | optimalFlow_1.25.0.zip |
| macOS binary (arm64) | optimalFlow_1.25.0.tgz |
| macOS binary (x86_64) | optimalFlow_1.25.0.tgz |
Dependencies
Depends: dplyr, optimalFlowData, rlang (>= 0.4.0)
Imports: transport, parallel, Rfast, robustbase, dbscan, randomForest, foreach, graphics, doParallel, stats, flowMeans, rgl, ellipse