DOI: 10.18129/B9.bioc.pdInfoBuilder  

This is the development version of pdInfoBuilder; for the stable release version, see pdInfoBuilder.

Platform Design Information Package Builder

Bioconductor version: Development (3.18)

Builds platform design information packages. These consist of a SQLite database containing feature-level data such as x, y position on chip and featureSet ID. The database also incorporates featureSet-level annotation data. The products of this packages are used by the oligo pkg.

Author: Seth Falcon, Vince Carey, Matt Settles, Kristof de Beuf, Benilton Carvalho

Maintainer: Benilton Carvalho <benilton at unicamp.br>

Citation (from within R, enter citation("pdInfoBuilder")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF Building Annotation Packages with pdInfoBuilder for Use with the oligo Package
PDF R Script PDInfo Package Building Affymetrix Mapping Chips
PDF   Reference Manual
Text   NEWS


biocViews Annotation, Infrastructure, Software
Version 1.65.0
In Bioconductor since BioC 2.0 (R-2.5) (16.5 years)
License Artistic-2.0
Depends R (>= 3.2.0), methods, Biobase(>= 2.27.3), RSQLite (>= 1.0.0), affxparser(>= 1.39.4), oligo(>= 1.31.5)
Imports Biostrings(>= 2.35.12), BiocGenerics(>= 0.13.11), DBI (>= 0.3.1), IRanges(>= 2.1.43), oligoClasses(>= 1.29.6), S4Vectors(>= 0.5.22)
Depends On Me
Imports Me
Suggests Me maqcExpression4plex
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package pdInfoBuilder_1.65.0.tar.gz
Windows Binary pdInfoBuilder_1.65.0.zip
macOS Binary (x86_64) pdInfoBuilder_1.65.0.tgz
macOS Binary (arm64) pdInfoBuilder_1.65.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/pdInfoBuilder
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/pdInfoBuilder
Bioc Package Browser https://code.bioconductor.org/browse/pdInfoBuilder/
Package Short Url https://bioconductor.org/packages/pdInfoBuilder/
Package Downloads Report Download Stats

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