DOI: 10.18129/B9.bioc.pepStat    

This is the development version of pepStat; for the stable release version, see pepStat.

Statistical analysis of peptide microarrays

Bioconductor version: Development (3.9)

Statistical analysis of peptide microarrays

Author: Raphael Gottardo, Gregory C Imholte, Renan Sauteraud, Mike Jiang

Maintainer: Gregory C Imholte <gimholte at>

Citation (from within R, enter citation("pepStat")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("pepStat", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script Full peptide microarray analysis
PDF   Reference Manual


biocViews Microarray, Preprocessing, Software
Version 1.17.0
In Bioconductor since BioC 3.0 (R-3.1) (4.5 years)
License Artistic-2.0
Depends R (>= 3.0.0), Biobase, IRanges
Imports limma, fields, GenomicRanges, ggplot2, plyr, tools, methods, data.table
Suggests pepDat, Pviz, knitr, shiny
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

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Follow Installation instructions to use this package in your R session.

Source Package pepStat_1.17.0.tar.gz
Windows Binary (32- & 64-bit)
Mac OS X 10.11 (El Capitan) pepStat_1.17.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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