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preprocessCore

This is the development version of preprocessCore; for the stable release version, see preprocessCore.

A collection of pre-processing functions


Bioconductor version: Development (3.19)

A library of core preprocessing routines.

Author: Ben Bolstad <bmb at bmbolstad.com>

Maintainer: Ben Bolstad <bmb at bmbolstad.com>

Citation (from within R, enter citation("preprocessCore")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("preprocessCore")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews Infrastructure, Software
Version 1.65.0
In Bioconductor since BioC 2.1 (R-2.6) (16.5 years)
License LGPL (>= 2)
Depends
Imports stats
System Requirements
URL https://github.com/bmbolstad/preprocessCore
See More
Suggests
Linking To
Enhances
Depends On Me affyPLM, AgiMicroRna, cqn, crlmm, RefPlus
Imports Me affy, BloodGen3Module, bnbc, ChAMP, cn.farms, EMDomics, ExiMiR, fastLiquidAssociation, frma, frmaTools, GSE13015, hipathia, iCheck, ImmuneSpaceR, InPAS, lumi, MADSEQ, MBCB, MBQN, MEDIPS, methylclock, mimager, minfi, MSPrep, MSstats, NormalyzerDE, oligo, PanomiR, PECA, PhosR, Pigengene, qPLEXanalyzer, quantiseqr, sesame, soGGi, tidybulk, yarn
Suggests Me DAPAR, MsCoreUtils, multiClust, QFeatures, roastgsa, scp, splatter, wateRmelon
Links To Me affy, affyPLM, crlmm, oligo
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package preprocessCore_1.65.0.tar.gz
Windows Binary preprocessCore_1.65.0.zip (64-bit only)
macOS Binary (x86_64) preprocessCore_1.65.0.tgz
macOS Binary (arm64) preprocessCore_1.65.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/preprocessCore
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/preprocessCore
Bioc Package Browser https://code.bioconductor.org/browse/preprocessCore/
Package Short Url https://bioconductor.org/packages/preprocessCore/
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