Registration Open for Bioc2024 July 24-26


This is the development version of reconsi; for the stable release version, see reconsi.

Resampling Collapsed Null Distributions for Simultaneous Inference

Bioconductor version: Development (3.20)

Improves simultaneous inference under dependence of tests by estimating a collapsed null distribution through resampling. Accounting for the dependence between tests increases the power while reducing the variability of the false discovery proportion. This dependence is common in genomics applications, e.g. when combining flow cytometry measurements with microbiome sequence counts.

Author: Stijn Hawinkel [cre, aut]

Maintainer: Stijn Hawinkel <stijn.hawinkel at>

Citation (from within R, enter citation("reconsi")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Manual for the RCM pacakage HTML R Script
Reference Manual PDF


biocViews FlowCytometry, Metagenomics, Microbiome, MultipleComparison, Software
Version 1.17.0
In Bioconductor since BioC 3.11 (R-4.0) (4 years)
License GPL-2
Imports phyloseq, ks, reshape2, ggplot2, stats, methods, graphics, grDevices, matrixStats, Matrix
System Requirements
Bug Reports
See More
Suggests knitr, rmarkdown, testthat
Linking To
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package reconsi_1.17.0.tar.gz
Windows Binary
macOS Binary (x86_64) reconsi_1.17.0.tgz
macOS Binary (arm64) reconsi_1.17.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
Bioc Package Browser
Package Short Url
Package Downloads Report Download Stats