DOI: 10.18129/B9.bioc.roar    

This is the development version of roar; for the stable release version, see roar.

Identify differential APA usage from RNA-seq alignments

Bioconductor version: Development (3.9)

Identify preferential usage of APA sites, comparing two biological conditions, starting from known alternative sites and alignments obtained from standard RNA-seq experiments.

Author: Elena Grassi

Maintainer: Elena Grassi <grassi.e at>

Citation (from within R, enter citation("roar")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("roar", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



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biocViews HighThroughputSequencing, RNAseq, Sequencing, Software, Transcription
Version 1.19.0
In Bioconductor since BioC 2.14 (R-3.1) (5 years)
License GPL-3
Depends R (>= 3.0.1)
Imports methods, BiocGenerics, S4Vectors, IRanges, GenomicRanges, SummarizedExperiment, GenomicAlignments(>= 0.99.4), rtracklayer, GenomeInfoDb
Suggests RNAseqData.HNRNPC.bam.chr14, testthat
Depends On Me
Imports Me XBSeq
Suggests Me
Links To Me
Build Report  

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Follow Installation instructions to use this package in your R session.

Source Package roar_1.19.0.tar.gz
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Mac OS X 10.11 (El Capitan) roar_1.19.0.tgz
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