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sights

This is the development version of sights; for the stable release version, see sights.

Statistics and dIagnostic Graphs for HTS


Bioconductor version: Development (3.19)

SIGHTS is a suite of normalization methods, statistical tests, and diagnostic graphical tools for high throughput screening (HTS) assays. HTS assays use microtitre plates to screen large libraries of compounds for their biological, chemical, or biochemical activity.

Author: Elika Garg [aut, cre], Carl Murie [aut], Heydar Ensha [ctb], Robert Nadon [aut]

Maintainer: Elika Garg <elika.garg at mail.mcgill.ca>

Citation (from within R, enter citation("sights")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("sights")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("sights")
Using **SIGHTS** R-package HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews BatchEffect, CellBasedAssays, ImmunoOncology, MicrotitrePlateAssay, MultipleComparison, Normalization, Preprocessing, QualityControl, Software, Visualization
Version 1.29.0
In Bioconductor since BioC 3.4 (R-3.3) (7.5 years)
License GPL-3 | file LICENSE
Depends R (>= 3.3)
Imports MASS (>= 7.3), qvalue(>= 2.2), ggplot2 (>= 2.0), reshape2 (>= 1.4), lattice (>= 0.2), stats (>= 3.3)
System Requirements
URL https://eg-r.github.io/sights/
Bug Reports https://github.com/eg-r/sights/issues
See More
Suggests testthat, knitr, rmarkdown, ggthemes, gridExtra, xlsx
Linking To
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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package sights_1.29.0.tar.gz
Windows Binary sights_1.29.0.zip
macOS Binary (x86_64) sights_1.29.0.tgz
macOS Binary (arm64) sights_1.29.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/sights
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/sights
Bioc Package Browser https://code.bioconductor.org/browse/sights/
Package Short Url https://bioconductor.org/packages/sights/
Package Downloads Report Download Stats