DOI: 10.18129/B9.bioc.similaRpeak    

This is the development version of similaRpeak; for the stable release version, see similaRpeak.

Metrics to estimate a level of similarity between two ChIP-Seq profiles

Bioconductor version: Development (3.9)

This package calculates metrics which assign a level of similarity between ChIP-Seq profiles.

Author: Astrid Deschenes [cre, aut], Elsa Bernatchez [aut], Charles Joly Beauparlant [aut], Fabien Claude Lamaze [aut], Rawane Samb [aut], Pascal Belleau [aut], Arnaud Droit [aut]

Maintainer: Astrid Deschenes <adeschen at>

Citation (from within R, enter citation("similaRpeak")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("similaRpeak", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



HTML R Script Similarity between two ChIP-Seq profiles
PDF   Reference Manual
Text   NEWS


biocViews BiologicalQuestion, ChIPSeq, DifferentialExpression, Genetics, MultipleComparison, Software
Version 1.15.0
In Bioconductor since BioC 3.1 (R-3.2) (4 years)
License Artistic-2.0
Depends R6 (>= 2.0)
Imports stats
Suggests RUnit, BiocGenerics, knitr, Rsamtools, GenomicAlignments, rtracklayer, rmarkdown, BiocStyle
Depends On Me
Imports Me
Suggests Me metagene, metagene
Links To Me
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Follow Installation instructions to use this package in your R session.

Source Package similaRpeak_1.15.0.tar.gz
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Mac OS X 10.11 (El Capitan) similaRpeak_1.15.0.tgz
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