tRNAdbImport
Importing from tRNAdb and mitotRNAdb as GRanges objects
Bioconductor version: 3.24 · Package version: 1.31.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
tRNAdbImport imports the entries of the tRNAdb and mtRNAdb (http://trna.bioinf.uni-leipzig.de) as GRanges object.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("tRNAdbImport")Details
| Maintainer | Felix G.M. Ernst <felix.gm.ernst@outlook.com> |
| Author | Felix G.M. Ernst [aut, cre] (ORCID: <https://orcid.org/0000-0001-5064-0928>) |
| License | GPL-3 + file LICENSE |
| Bug Reports | https://github.com/FelixErnst/tRNAdbImport/issues |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | DataImport, Software, Visualization |
| Package Short Url | https://bioconductor.org/packages/tRNAdbImport/ |
Citation
From within R, enter citation("tRNAdbImport"):
Felix G.M. Ernst. tRNAdbImport: Importing from tRNAdb and mitotRNAdb as GRanges objects. doi:10.18129/B9.bioc.tRNAdbImport, R package version 1.31.0, https://bioconductor.org/packages/tRNAdbImport.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | tRNAdbImport_1.31.0.tar.gz |
| Windows binary (x86_64) | tRNAdbImport_1.31.0.zip |
| macOS binary (arm64) | tRNAdbImport_1.31.0.tgz |
| macOS binary (x86_64) | tRNAdbImport_1.31.0.tgz |
Dependencies
Depends: R (>= 3.6), GenomicRanges, Modstrings, Structstrings, tRNA
Imports: Biostrings, stringr, httr2, xml2, S4Vectors, methods, IRanges, utils
Suggests: BiocGenerics, knitr, rmarkdown, testthat, httptest, BiocStyle, rtracklayer
Reverse dependencies
Imports Me (1): EpiTxDb