tRNAdbImport

DOI: 10.18129/B9.bioc.tRNAdbImport    

This is the development version of tRNAdbImport; for the stable release version, see tRNAdbImport.

Importing from tRNAdb and mitotRNAdb as GRanges objects

Bioconductor version: Development (3.9)

tRNAdbImport imports the entries of the tRNAdb and mtRNAdb (http://trna.bioinf.uni-leipzig.de) as GRanges object.

Author: Felix GM Ernst [aut, cre]

Maintainer: Felix GM Ernst <felix.gm.ernst at outlook.com>

Citation (from within R, enter citation("tRNAdbImport")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("tRNAdbImport", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("tRNAdbImport")

 

HTML R Script tRNAdbImport
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews DataImport, Software, Visualization
Version 1.1.1
In Bioconductor since BioC 3.8 (R-3.5) (< 6 months)
License GPL-3 + file LICENSE
Depends R (>= 3.5), GenomicRanges, Modstrings, Structstrings, tRNA
Imports Biostrings, stringr, xml2, S4Vectors, assertive, methods, httr, IRanges, utils
LinkingTo
Suggests knitr, rmarkdown, testthat, httptest, BiocStyle, rtracklayer
SystemRequirements
Enhances
URL
BugReports https://github.com/FelixErnst/tRNAdbImport/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package tRNAdbImport_1.1.1.tar.gz
Windows Binary tRNAdbImport_1.1.1.zip
Mac OS X 10.11 (El Capitan) tRNAdbImport_1.1.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/tRNAdbImport
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/tRNAdbImport
Package Short Url http://bioconductor.org/packages/tRNAdbImport/
Package Downloads Report Download Stats

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