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FDb.UCSC.snp135common.hg19

This is the development version of FDb.UCSC.snp135common.hg19; for the stable release version, see FDb.UCSC.snp135common.hg19.

UCSC common SNPs track for dbSNP build 135


Bioconductor version: Development (3.20)

makeFeatureDbFromUCSC cannot cope with this track, hence a package

Author: Tim Triche, Jr.

Maintainer: Tim Triche, Jr. <tim.triche at gmail.com>

Citation (from within R, enter citation("FDb.UCSC.snp135common.hg19")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("FDb.UCSC.snp135common.hg19")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews AnnotationData, Homo_sapiens
Version 1.0.0
License Artistic-2.0
Depends GenomicFeatures(>= 1.7.22)
Imports GenomicFeatures, AnnotationDbi
System Requirements
URL
See More
Suggests BSgenome.Hsapiens.UCSC.hg19, SNPlocs.Hsapiens.dbSNP.20111119
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me FDb.InfiniumMethylation.hg19
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package FDb.UCSC.snp135common.hg19_1.0.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/FDb.UCSC.snp135common.hg19/
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