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MafDb.TOPMed.freeze5.hg19

This is the development version of MafDb.TOPMed.freeze5.hg19; for the stable release version, see MafDb.TOPMed.freeze5.hg19.

Minor allele frequency data from TOPMed for hg19


Bioconductor version: Development (3.19)

Store minor allele frequency data from NHLBI TOPMed for the human genome version hg19.

Author: Robert Castelo [aut, cre]

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafDb.TOPMed.freeze5.hg19")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("MafDb.TOPMed.freeze5.hg19")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version 3.10.0
License Artistic-2.0
Depends R (>= 3.5.0), GenomicScores(>= 1.9.6)
Imports utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome
System Requirements
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Suggests SNPlocs.Hsapiens.dbSNP144.GRCh37
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MafDb.TOPMed.freeze5.hg19_3.10.0.tar.gz
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macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/MafDb.TOPMed.freeze5.hg19/
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