DOI: 10.18129/B9.bioc.GeuvadisTranscriptExpr    

This is the development version of GeuvadisTranscriptExpr; for the stable release version, see GeuvadisTranscriptExpr.

Data package with transcript expression and bi-allelic genotypes from the GEUVADIS project

Bioconductor version: Development (3.9)

Provides transcript expression and bi-allelic genotypes corresponding to the chromosome 19 for CEU individuals from the GEUVADIS project, Lappalainen et al.

Author: Malgorzata Nowicka [aut, cre]

Maintainer: Malgorzata Nowicka <gosia.nowicka at>

Citation (from within R, enter citation("GeuvadisTranscriptExpr")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("GeuvadisTranscriptExpr", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script Preprocessing and preparation of transcript expression and genotypes from the GEUVADIS project for sQTL analysis
PDF   Reference Manual
Text   NEWS


biocViews ExperimentData, ExpressionData, Genome, Homo_sapiens_Data, RNASeqData, SNPData, SequencingData
Version 1.11.0
License GPL (>= 3)
Depends R (>= 3.3.0)
Suggests limma, rtracklayer, GenomicRanges, Rsamtools, VariantAnnotation, tools, BiocStyle, knitr, testthat
Depends On Me
Imports Me
Suggests Me DRIMSeq
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package GeuvadisTranscriptExpr_1.11.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone
Source Repository (Developer Access) git clone
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