DOI: 10.18129/B9.bioc.TENxBrainData    

This is the development version of TENxBrainData; for the stable release version, see TENxBrainData.

Data from the 10X 1.3 Million Brain Cell Study

Bioconductor version: Development (3.9)

Single-cell RNA-seq data for 1.3 million brain cells from E18 mice, generated by 10X Genomics.

Author: Aaron Lun [aut], Martin Morgan [aut], Bioconductor Package Maintainer [cre]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("TENxBrainData")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("TENxBrainData", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



HTML R Script Exploring the 1.3 million brain cell scRNA-seq data from 10X Genomics
PDF   Reference Manual


biocViews ExperimentData, ExpressionData, RNASeqData, SequencingData, SingleCellData
Version 1.3.0
License CC BY 4.0
Depends SingleCellExperiment, HDF5Array
Imports AnnotationHub(>= 2.9.22), ExperimentHub
Suggests knitr, BiocStyle, snow, BiocFileCache, BiocParallel, data.table
Depends On Me
Imports Me
Suggests Me HDF5Array, simpleSingleCell
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TENxBrainData_1.3.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/TENxBrainData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TENxBrainData
Package Short Url http://bioconductor.org/packages/TENxBrainData/
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