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TENxBrainData

This is the development version of TENxBrainData; for the stable release version, see TENxBrainData.

Data from the 10X 1.3 Million Brain Cell Study


Bioconductor version: Development (3.19)

Single-cell RNA-seq data for 1.3 million brain cells from E18 mice, generated by 10X Genomics.

Author: Aaron Lun [aut], Martin Morgan [aut], Bioconductor Package Maintainer [cre]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("TENxBrainData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("TENxBrainData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TENxBrainData")
Exploring the 1.3 million brain cell scRNA-seq data from 10X Genomics HTML R Script
Reference Manual PDF

Details

biocViews ExperimentData, ExpressionData, RNASeqData, SequencingData, SingleCellData
Version 1.23.0
License CC BY 4.0
Depends SingleCellExperiment, HDF5Array
Imports AnnotationHub(>= 2.9.22), ExperimentHub
System Requirements
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Suggests knitr, BiocStyle, snow, BiocFileCache, BiocParallel, data.table, rmarkdown
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me HDF5Array
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TENxBrainData_1.23.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/TENxBrainData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TENxBrainData
Package Short Url https://bioconductor.org/packages/TENxBrainData/
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