mtbls2
This is the development version of mtbls2; for the stable release version, see mtbls2.
MetaboLights MTBLS2: Comparative LC/MS-based profiling of silver nitrate-treated Arabidopsis thaliana leaves of wild-type and cyp79B2 cyp79B3 double knockout plants. Böttcher et al. (2004)
Bioconductor version: Development (3.20)
Indole-3-acetaldoxime (IAOx) represents an early intermediate of the biosynthesis of a variety of indolic secondary metabolites including the phytoanticipin indol-3-ylmethyl glucosinolate and the phytoalexin camalexin (3-thiazol-2'-yl-indole). Arabidopsis thaliana cyp79B2 cyp79B3 double knockout plants are completely impaired in the conversion of tryptophan to indole-3-acetaldoxime and do not accumulate IAOx-derived metabolites any longer. Consequently, comparative analysis of wild-type and cyp79B2 cyp79B3 plant lines has the potential to explore the complete range of IAOx-derived indolic secondary metabolites.
Author: Steffen Neumann <sneumann at ipb-halle.de>
Maintainer: Steffen Neumann <sneumann at ipb-halle.de>
citation("mtbls2")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("mtbls2")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Reference Manual | |
NEWS | Text |
Details
biocViews | ExperimentData, MassSpectrometryData, RepositoryData |
Version | 1.35.0 |
License | CC0 |
Depends | R (>= 2.10) |
Imports | |
System Requirements | |
URL | http://www.ebi.ac.uk/metabolights/MTBLS2 https://github.com/sneumann/mtbls2 |
See More
Suggests | xcms(>= 3.13.8), CAMERA, Risa(>= 1.0.0), knitr, Heatplus, pcaMethods, sp, rmarkdown |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | IPO, yamss |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | mtbls2_1.35.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/mtbls2 |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/mtbls2 |
Package Short Url | https://bioconductor.org/packages/mtbls2/ |
Package Downloads Report | Download Stats |