zebrafishRNASeq
This is the development version of zebrafishRNASeq; for the stable release version, see zebrafishRNASeq.
Zebrafish RNA-Seq Experimental Data from Ferreira et al. (2014)
Bioconductor version: Development (3.24)
Gene-level read counts from RNA-Seq for gallein-treated and control zebrafish.
Author: Davide Risso
Maintainer: Davide Risso <risso.davide at gmail.com>
citation("zebrafishRNASeq")):Davide Risso. zebrafishRNASeq: Zebrafish RNA-Seq Experimental Data from Ferreira et al. (2014). doi:10.18129/B9.bioc.zebrafishRNASeq, R package version 1.33.0, https://bioconductor.org/packages/zebrafishRNASeq.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("zebrafishRNASeq") For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("zebrafishRNASeq") | Pre-Processing for the Zebrafish RNA-Seq Gene-Level Counts | HTML | R Script |
| Reference Manual |
Details
| biocViews | Danio_rerio_Data, ExperimentData, RNASeqData |
| Version | 1.33.0 |
| In Bioconductor since | BioC 3.0 (R-3.1) (12 years) |
| License | GPL |
| Depends | R (>= 2.10) |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | BiocStyle, knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | RUVSeq, sva |
| Links To Me | |
| Build Report | Build Report, r-universe |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | zebrafishRNASeq_1.33.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (sonoma-arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/zebrafishRNASeq |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/zebrafishRNASeq |
| Package Short Url | https://bioconductor.org/packages/zebrafishRNASeq/ |
| Package Downloads Report | Download Stats |