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zebrafishRNASeq

This is the development version of zebrafishRNASeq; for the stable release version, see zebrafishRNASeq.

Zebrafish RNA-Seq Experimental Data from Ferreira et al. (2014)


Bioconductor version: Development (3.19)

Gene-level read counts from RNA-Seq for gallein-treated and control zebrafish.

Author: Davide Risso

Maintainer: Davide Risso <risso.davide at gmail.com>

Citation (from within R, enter citation("zebrafishRNASeq")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("zebrafishRNASeq")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("zebrafishRNASeq")
Pre-Processing for the Zebrafish RNA-Seq Gene-Level Counts PDF R Script
Reference Manual PDF

Details

biocViews Danio_rerio_Data, ExperimentData, RNASeqData
Version 1.23.0
License GPL
Depends R (>= 2.10)
Imports
System Requirements
URL
See More
Suggests BiocStyle, knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me RUVSeq, sva
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package zebrafishRNASeq_1.23.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/zebrafishRNASeq
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/zebrafishRNASeq
Package Short Url https://bioconductor.org/packages/zebrafishRNASeq/
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