rawrr
Direct Access to Orbitrap Data and Beyond
Bioconductor version: 3.23 · Package version: 1.20.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
This package wraps the functionality of the Thermo Fisher Scientic RawFileReader .NET 8.0 assembly. Within the R environment, spectra and chromatograms are represented by S3 objects. The package provides basic functions to download and install the required third-party libraries. The package is developed, tested, and used at the Functional Genomics Center Zurich, Switzerland.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("rawrr")Details
| Maintainer | Christian Panse <cp@fgcz.ethz.ch> |
| Author | Christian Panse [aut, cre] (ORCID: <https://orcid.org/0000-0003-1975-3064>), Leonardo Schwarz [ctb] (ORCID: <https://orcid.org/0009-0003-1828-6924>), Tobias Kockmann [aut] (ORCID: <https://orcid.org/0000-0002-1847-885X>) |
| License | GPL-3 |
| URL | https://github.com/fgcz/rawrr/ |
| Bug Reports | https://github.com/fgcz/rawrr/issues |
| System Requirements | .NET 8.0 (optional; required only if you want to compile and link the C# code) |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | Infrastructure, MassSpectrometry, Metabolomics, Proteomics, Software |
| Package Short Url | https://bioconductor.org/packages/rawrr/ |
Citation
From within R, enter citation("rawrr"):
Christian Panse, Tobias Kockmann. rawrr: Direct Access to Orbitrap Data and Beyond. doi:10.18129/B9.bioc.rawrr, R package version 1.20.0, https://bioconductor.org/packages/rawrr.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | rawrr_1.20.0.tar.gz |
| macOS binary (arm64) | rawrr_1.20.0.tgz |
| macOS binary (x86_64) | rawrr_1.20.0.tgz |
Dependencies
Depends: R (>= 4.5)
Imports: grDevices, graphics, stats, utils
Suggests: BiocStyle (>= 2.5), ExperimentHub, knitr, protViz (>= 0.7), rmarkdown, tartare (>= 1.5), testthat