IWTomics
Interval-Wise Testing for Omics Data
Bioconductor version: Release (3.19)
Implementation of the Interval-Wise Testing (IWT) for omics data. This inferential procedure tests for differences in "Omics" data between two groups of genomic regions (or between a group of genomic regions and a reference center of symmetry), and does not require fixing location and scale at the outset.
Author: Marzia A Cremona, Alessia Pini, Francesca Chiaromonte, Simone Vantini
Maintainer: Marzia A Cremona <mac78 at psu.edu>
citation("IWTomics")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("IWTomics")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("IWTomics")
Introduction to IWTomics | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | DataImport, DifferentialExpression, DifferentialMethylation, DifferentialPeakCalling, GenomeAnnotation, MultipleComparison, Software, StatisticalMethod |
Version | 1.28.0 |
In Bioconductor since | BioC 3.5 (R-3.4) (7.5 years) |
License | GPL (>=2) |
Depends | R (>= 3.5.0), GenomicRanges |
Imports | parallel, gtable, grid, graphics, methods, IRanges, KernSmooth, fda, S4Vectors, grDevices, stats, utils, tools |
System Requirements | |
URL |
See More
Suggests | knitr |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | IWTomics_1.28.0.tar.gz |
Windows Binary | IWTomics_1.28.0.zip |
macOS Binary (x86_64) | IWTomics_1.28.0.tgz |
macOS Binary (arm64) | IWTomics_1.28.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/IWTomics |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/IWTomics |
Bioc Package Browser | https://code.bioconductor.org/browse/IWTomics/ |
Package Short Url | https://bioconductor.org/packages/IWTomics/ |
Package Downloads Report | Download Stats |