MSstatsQC
Longitudinal system suitability monitoring and quality control for proteomic experiments
Bioconductor version: Release (3.20)
MSstatsQC is an R package which provides longitudinal system suitability monitoring and quality control tools for proteomic experiments.
Author: Eralp Dogu [aut, cre], Sara Taheri [aut], Olga Vitek [aut]
Maintainer: Eralp Dogu <eralp.dogu at gmail.com>
Citation (from within R, enter
citation("MSstatsQC")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MSstatsQC")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MSstatsQC")
MSstatsQC | HTML | R Script |
Reference Manual | ||
NEWS | Text |
Details
biocViews | MassSpectrometry, Proteomics, QualityControl, Software |
Version | 2.24.0 |
In Bioconductor since | BioC 3.6 (R-3.4) (7 years) |
License | Artistic License 2.0 |
Depends | R (>= 3.5.0) |
Imports | dplyr, plotly, ggplot2, ggExtra, stats, grid, MSnbase, qcmetrics |
System Requirements | |
URL | http://msstats.org/msstatsqc |
Bug Reports | https://groups.google.com/forum/#!forum/msstatsqc |
See More
Suggests | knitr, rmarkdown, testthat, RforProteomics |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | MSstatsQCgui |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | MSstatsQC_2.24.0.tar.gz |
Windows Binary (x86_64) | MSstatsQC_2.24.0.zip (64-bit only) |
macOS Binary (x86_64) | MSstatsQC_2.24.0.tgz |
macOS Binary (arm64) | MSstatsQC_2.23.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/MSstatsQC |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/MSstatsQC |
Bioc Package Browser | https://code.bioconductor.org/browse/MSstatsQC/ |
Package Short Url | https://bioconductor.org/packages/MSstatsQC/ |
Package Downloads Report | Download Stats |