Bioconductor Developer Survey 2026 Now Open!

MeSHDbi

This is the released version of MeSHDbi; for the devel version, see MeSHDbi.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14

DBI to construct MeSH-related package from sqlite file


Bioconductor version: Release (3.23)

The package is unified implementation of MeSH.db, MeSH.AOR.db, and MeSH.PCR.db and also is interface to construct Gene-MeSH package (MeSH.XXX.eg.db). loadMeSHDbiPkg import sqlite file and generate MeSH.XXX.eg.db.

Author: Koki Tsuyuzaki

Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>

Citation (from within R, enter citation("MeSHDbi")):

Koki Tsuyuzaki. MeSHDbi: DBI to construct MeSH-related package from sqlite file. doi:10.18129/B9.bioc.MeSHDbi, R package version 1.48.0, https://bioconductor.org/packages/MeSHDbi.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MeSHDbi")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MeSHDbi")
MeSH.db PDF
Reference ManualPDF
NEWSText

Details

biocViews Annotation, AnnotationData, Infrastructure, Software
Version1.48.0
In Bioconductor sinceBioC 2.14 (R-3.1) (12.5 years)
License Artistic-2.0
Depends R (>= 3.0.1)
Imports methods, AnnotationDbi (>= 1.31.19), RSQLite, Biobase
System Requirements
URL
See More
Suggests testthat
Linking To
Enhances
Depends On Me
Imports Me meshes, meshr, scTensor
Suggests Me
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MeSHDbi_1.48.0.tar.gz
Windows Binary (x86_64) MeSHDbi_1.48.0.zip
macOS Binary (big-sur-x86_64) MeSHDbi_1.48.0.tgz
macOS Binary (sonoma-arm64) MeSHDbi_1.48.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/MeSHDbi
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/MeSHDbi
Package Short Url https://bioconductor.org/packages/MeSHDbi/
Package Downloads ReportDownload Stats