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MiChip

This is the released version of MiChip; for the devel version, see MiChip.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

MiChip Parsing and Summarizing Functions


Bioconductor version: Release (3.23)

This package takes the MiChip miRNA microarray .grp scanner output files and parses these out, providing summary and plotting functions to analyse MiChip hybridizations. A set of hybridizations is packaged into an ExpressionSet allowing it to be used by other BioConductor packages.

Author: Jonathon Blake <blake at embl.de>

Maintainer: Jonathon Blake <blake at embl.de>

Citation (from within R, enter citation("MiChip")):

Jonathon Blake. MiChip: MiChip Parsing and Summarizing Functions. doi:10.18129/B9.bioc.MiChip, R package version 1.66.0, https://bioconductor.org/packages/MiChip.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MiChip")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MiChip")
MiChip miRNA Microarray Processing PDF R Script
Reference ManualPDF

Details

biocViews Microarray, Preprocessing, Software
Version1.66.0
In Bioconductor sinceBioC 2.5 (R-2.10) (17 years)
License GPL (>= 2)
Depends R (>= 2.3.0), Biobase
Imports Biobase
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MiChip_1.66.0.tar.gz
Windows Binary (x86_64) MiChip_1.66.0.zip (64-bit only)
macOS Binary (big-sur-x86_64) MiChip_1.66.0.tgz
macOS Binary (sonoma-arm64) MiChip_1.66.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/MiChip
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/MiChip
Package Short Url https://bioconductor.org/packages/MiChip/
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