The search feature on this website is currently unavailable.
To use google search type site: "search term" in browser.


Visualizations of expressionSet Bioconductor object

Bioconductor version: Release (3.18)

Utility functions for visualization of expressionSet (or SummarizedExperiment) Bioconductor object, including spectral map, tsne and linear discriminant analysis. Static plot via the ggplot2 package or interactive via the ggvis or rbokeh packages are available.

Author: Laure Cougnaud <laure.cougnaud at>

Maintainer: Laure Cougnaud <laure.cougnaud at>

Citation (from within R, enter citation("esetVis")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

esetVis package HTML R Script
Reference Manual PDF


biocViews DataRepresentation, DimensionReduction, Pathways, PrincipalComponent, Software, Visualization
Version 1.28.2
In Bioconductor since BioC 3.4 (R-3.3) (7.5 years)
License GPL-3
Imports mpm, hexbin, Rtsne, MLP, grid, Biobase, MASS, stats, utils, grDevices, methods
System Requirements
See More
Suggests ggplot2, ggvis, plotly, ggrepel, knitr, rmarkdown, ALL, hgu95av2.db, AnnotationDbi, pander, SummarizedExperiment, GO.db
Linking To
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package esetVis_1.28.2.tar.gz
Windows Binary
macOS Binary (x86_64) esetVis_1.28.2.tgz
macOS Binary (arm64) esetVis_1.28.2.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
Bioc Package Browser
Package Short Url
Package Downloads Report Download Stats
Old Source Packages for BioC 3.18 Source Archive