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iSEE extension for a landing page to a custom collection of data sets

Bioconductor version: Release (3.19)

This package provides an interface to any collection of data sets within a single iSEE web-application. The main functionality of this package is to define a custom landing page allowing app maintainers to list a custom collection of data sets that users can selected from and directly load objects into an iSEE web-application.

Author: Kevin Rue-Albrecht [aut, cre] , Thomas Sandmann [ctb] , Federico Marini [aut] , Denali Therapeutics [fnd]

Maintainer: Kevin Rue-Albrecht <kevinrue67 at>

Citation (from within R, enter citation("iSEEindex")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Adding custom header and footer to the landing page HTML R Script
Implementing custom iSEEindex resources HTML R Script
Introduction to iSEEindex HTML R Script
Reference Manual PDF


biocViews Infrastructure, Software
Version 1.2.0
In Bioconductor since BioC 3.18 (R-4.3) (0.5 years)
License Artistic-2.0
Depends SummarizedExperiment, SingleCellExperiment
Imports BiocFileCache, DT, iSEE, methods,, rintrojs, shiny, shinydashboard, shinyjs, stringr, urltools, utils
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Suggests BiocStyle, covr, knitr, RefManageR, rmarkdown, sessioninfo, testthat (>= 3.0.0), yaml
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Follow Installation instructions to use this package in your R session.

Source Package iSEEindex_1.2.0.tar.gz
Windows Binary
macOS Binary (x86_64) iSEEindex_1.2.0.tgz
macOS Binary (arm64) iSEEindex_1.2.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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