survcomp

DOI: 10.18129/B9.bioc.survcomp    

Performance Assessment and Comparison for Survival Analysis

Bioconductor version: Release (3.7)

Assessment and Comparison for Performance of Risk Prediction (Survival) Models.

Author: Benjamin Haibe-Kains, Markus Schroeder, Catharina Olsen, Christos Sotiriou, Gianluca Bontempi, John Quackenbush, Samuel Branders, Zhaleh Safikhani

Maintainer: Benjamin Haibe-Kains <benjamin.haibe.kains at utoronto.ca>, Markus Schroeder <markus.schroeder at ucdconnect.ie>, Catharina Olsen <colsen at ulb.ac.be>

Citation (from within R, enter citation("survcomp")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("survcomp")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("survcomp")

 

PDF R Script SurvComp: a package for performance assessment and comparison for survival analysis
PDF   Reference Manual

Details

biocViews DifferentialExpression, GeneExpression, Software, Visualization
Version 1.30.0
In Bioconductor since BioC 2.8 (R-2.13) (7.5 years)
License Artistic-2.0
Depends survival, prodlim, R (>= 3.4)
Imports ipred, SuppDists, KernSmooth, survivalROC, bootstrap, grid, rmeta, stats, graphics
LinkingTo
Suggests Hmisc, CPE, clinfun, xtable, Biobase
SystemRequirements
Enhances
URL http://www.pmgenomics.ca/bhklab/
Depends On Me genefu
Imports Me GenRank
Suggests Me breastCancerMAINZ, breastCancerNKI, breastCancerTRANSBIG, breastCancerUNT, breastCancerUPP, breastCancerVDX, metaseqR
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package survcomp_1.30.0.tar.gz
Windows Binary survcomp_1.30.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) survcomp_1.30.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/survcomp
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/survcomp
Package Short Url http://bioconductor.org/packages/survcomp/
Package Downloads Report Download Stats

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