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AssessORFData

Data and Files for the AssessORF Package


Bioconductor version: Release (3.18)

This package provides access to mapping and results objects generated by the AssessORF package, as well as the genome sequences for the strains corresponding to those objects.

Author: Deepank Korandla [aut, cre]

Maintainer: Deepank Korandla <dkorandl at alumni.cmu.edu>

Citation (from within R, enter citation("AssessORFData")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AssessORFData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AssessORFData")
Using AssessORFData PDF R Script
Reference Manual PDF

Details

biocViews Bacillus_subtilis_Data, Escherichia_coli_Data, ExperimentData, Genome, OrganismData, Proteome, Pseudomonas_aeruginosa_Data, SequencingData, Staphylococcus_aureus_Data
Version 1.20.0
License GPL-3
Depends R (>= 3.5.0)
Imports DECIPHER, utils
System Requirements
URL
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Suggests AssessORF, BiocStyle, knitr, rmarkdown
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Enhances
Depends On Me
Imports Me
Suggests Me AssessORF
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package AssessORFData_1.20.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/AssessORFData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/AssessORFData
Package Short Url https://bioconductor.org/packages/AssessORFData/
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