EGSEAdata
Gene set collections for the EGSEA package
Bioconductor version: Release (3.19)
This package includes gene set collections that are used for the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing. It includes Human and Mouse versions of the MSidDB (Subramanian, et al. (2005) PNAS, 102(43):15545-15550) and GeneSetDB (Araki, et al. (2012) FEBS Open Bio, 2:76-82) collections.
Author: Monther Alhamdoosh, Yifang Hu and Gordon K. Smyth
Maintainer: Monther Alhamdoosh <m.hamdoosh at gmail.com>
Citation (from within R, enter
citation("EGSEAdata")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("EGSEAdata")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Reference Manual | |
NEWS | Text |
LICENSE | Text |
Details
biocViews | ExperimentData, Homo_sapiens_Data, Mus_musculus_Data, Rattus_norvegicus_Data |
Version | 1.32.0 |
License | file LICENSE |
Depends | R (>= 3.4) |
Imports | |
System Requirements | |
URL |
See More
Suggests | EGSEA |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | EGSEA |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | EGSEAdata_1.32.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/EGSEAdata |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/EGSEAdata |
Package Short Url | https://bioconductor.org/packages/EGSEAdata/ |
Package Downloads Report | Download Stats |