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RTCGA.mRNA

This is the released version of RTCGA.mRNA; for the devel version, see RTCGA.mRNA.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3

mRNA datasets from The Cancer Genome Atlas Project

DOI: 10.18129/B9.bioc.RTCGA.mRNA

Bioconductor version: Release (3.23)

Package provides mRNA datasets from The Cancer Genome Atlas Project for all available cohorts types from http://gdac.broadinstitute.org/. Data format is explained here https://wiki.nci.nih.gov/display/TCGA/Gene+expression+data Data from 2015-11-01 snapshot.

Author: Witold Chodor <witoldchodor at gmail.com>

Maintainer: Marcin Kosinski <m.p.kosinski at gmail.com>

Citation (from within R, enter citation("RTCGA.mRNA")):

Witold Chodor. RTCGA.mRNA: mRNA datasets from The Cancer Genome Atlas Project. doi:10.18129/B9.bioc.RTCGA.mRNA, R package version 1.40.0, https://bioconductor.org/packages/RTCGA.mRNA.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RTCGA.mRNA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RTCGA.mRNA")

Details

Package Archives

Follow Installation instructions to use this package in your R session.