signatureSearchData
This is the released version of signatureSearchData; for the devel version, see signatureSearchData.
Datasets for signatureSearch package
Bioconductor version: Release (3.23)
CMAP/LINCS hdf5 databases and other annotations used for signatureSearch software package.
Author: Yuzhu Duan <yduan004 at ucr.edu>, Brendan Gongol <bgong001 at ucr.edu>, Thomas Girke <thomas.girke at ucr.edu>
Maintainer: Brendan Gongol <bgong001 at ucr.edu>
citation("signatureSearchData")):Yuzhu Duan, Brendan Gongol, Thomas Girke. signatureSearchData: Datasets for signatureSearch package. doi:10.18129/B9.bioc.signatureSearchData, R package version 1.26.0, https://bioconductor.org/packages/signatureSearchData.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("signatureSearchData") For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("signatureSearchData") | signatureSearchData | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | ExperimentData, ExperimentHub, ExpressionData |
| Version | 1.26.0 |
| In Bioconductor since | BioC 3.10 (R-3.6) (7 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.6) |
| Imports | ExperimentHub, utils, affy, limma, Biobase, magrittr, dplyr, R.utils, stats, rhdf5 |
| System Requirements | |
| URL |
See More
| Suggests | knitr, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | DFD, signatureSearch |
| Links To Me | |
| Build Report | Build Report, r-universe |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | signatureSearchData_1.26.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (sonoma-arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/signatureSearchData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/signatureSearchData |
| Package Short Url | https://bioconductor.org/packages/signatureSearchData/ |
| Package Downloads Report | Download Stats |