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zebrafishRNASeq

This is the released version of zebrafishRNASeq; for the devel version, see zebrafishRNASeq.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0

Zebrafish RNA-Seq Experimental Data from Ferreira et al. (2014)


Bioconductor version: Release (3.23)

Gene-level read counts from RNA-Seq for gallein-treated and control zebrafish.

Author: Davide Risso

Maintainer: Davide Risso <risso.davide at gmail.com>

Citation (from within R, enter citation("zebrafishRNASeq")):

Davide Risso. zebrafishRNASeq: Zebrafish RNA-Seq Experimental Data from Ferreira et al. (2014). doi:10.18129/B9.bioc.zebrafishRNASeq, R package version 1.32.0, https://bioconductor.org/packages/zebrafishRNASeq.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("zebrafishRNASeq")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("zebrafishRNASeq")
Pre-Processing for the Zebrafish RNA-Seq Gene-Level Counts HTML R Script
Reference ManualPDF

Details

biocViews Danio_rerio_Data, ExperimentData, RNASeqData
Version1.32.0
In Bioconductor sinceBioC 3.0 (R-3.1) (12 years)
License GPL
Depends R (>= 2.10)
Imports
System Requirements
URL
See More
Suggests BiocStyle, knitr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me RUVSeq, sva
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package zebrafishRNASeq_1.32.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/zebrafishRNASeq
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/zebrafishRNASeq
Package Short Url https://bioconductor.org/packages/zebrafishRNASeq/
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