| See download stats for: Bioconductor software packages Bioconductor experiment packages Bioconductor workflow packages |
Data as of Mon. 01 Dec 2025.
The number reported next to each package name is the download score, that is, the average number of distinct IPs that "hit" the package each month for the last 12 months (not counting the current month).
All annotation package stats in one file: annotation_pkg_stats.tab
All annotation download scores in one file: annotation_pkg_scores.tab
See Download stats for Bioconductor annotation repository (all packages combined)
BSgenome.Amellifera.BeeBase.assembly4 (57)
BSgenome.Amellifera.NCBI.AmelHAv3.1 (34)
BSgenome.Amellifera.UCSC.apiMel2 (55)
BSgenome.Amellifera.UCSC.apiMel2.masked (40)
BSgenome.Aofficinalis.NCBI.V1 (35)
BSgenome.Athaliana.TAIR.01222004 (4)
BSgenome.Athaliana.TAIR.04232008 (60)
BSgenome.Athaliana.TAIR.TAIR9 (137)
BSgenome.Btaurus.UCSC.bosTau3 (59)
BSgenome.Btaurus.UCSC.bosTau3.masked (42)
BSgenome.Btaurus.UCSC.bosTau4 (55)
BSgenome.Btaurus.UCSC.bosTau4.masked (39)
BSgenome.Btaurus.UCSC.bosTau6 (58)
BSgenome.Btaurus.UCSC.bosTau6.masked (50)
BSgenome.Btaurus.UCSC.bosTau8 (47)
BSgenome.Btaurus.UCSC.bosTau9 (62)
BSgenome.Btaurus.UCSC.bosTau9.masked (26)
BSgenome.Carietinum.NCBI.v1 (31)
BSgenome.Celegans.UCSC.ce10 (106)
BSgenome.Celegans.UCSC.ce11 (192)
BSgenome.Celegans.UCSC.ce2 (552)
BSgenome.Celegans.UCSC.ce6 (69)
BSgenome.Cfamiliaris.UCSC.canFam2 (59)
BSgenome.Cfamiliaris.UCSC.canFam2.masked (40)
BSgenome.Cfamiliaris.UCSC.canFam3 (91)
BSgenome.Cfamiliaris.UCSC.canFam3.masked (42)
BSgenome.Cjacchus.UCSC.calJac3 (30)
BSgenome.Cjacchus.UCSC.calJac4 (29)
BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1 (23)
BSgenome.Creinhardtii.JGI.v5.6 (27)
BSgenome.Dmelanogaster.BDGP.Release5 (1)
BSgenome.Dmelanogaster.FlyBase.r51 (1)
BSgenome.Dmelanogaster.UCSC.dm2 (74)
BSgenome.Dmelanogaster.UCSC.dm2.masked (27)
BSgenome.Dmelanogaster.UCSC.dm3 (446)
BSgenome.Dmelanogaster.UCSC.dm3.masked (31)
BSgenome.Dmelanogaster.UCSC.dm6 (153)
BSgenome.Drerio.UCSC.danRer10 (70)
BSgenome.Drerio.UCSC.danRer11 (99)
BSgenome.Drerio.UCSC.danRer5 (59)
BSgenome.Drerio.UCSC.danRer6.masked (40)
BSgenome.Drerio.UCSC.danRer7 (143)
BSgenome.Drerio.UCSC.danRer7.masked (39)
BSgenome.Dvirilis.Ensembl.dvircaf1 (26)
BSgenome.Ecoli.NCBI.20080805 (182)
BSgenome.Gaculeatus.UCSC.gasAcu1 (55)
BSgenome.Gaculeatus.UCSC.gasAcu1.masked (40)
BSgenome.Ggallus.UCSC.galGal3 (70)
BSgenome.Ggallus.UCSC.galGal3.masked (42)
BSgenome.Ggallus.UCSC.galGal4 (60)
BSgenome.Ggallus.UCSC.galGal4.masked (40)
BSgenome.Ggallus.UCSC.galGal5 (35)
BSgenome.Ggallus.UCSC.galGal6 (44)
BSgenome.Hsapiens.1000genomes.hs37d5 (547)
BSgenome.Hsapiens.NCBI.b36v3 (0)
BSgenome.Hsapiens.NCBI.GRCh38 (663)
BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 (77)
BSgenome.Hsapiens.UCSC.hg16 (3)
BSgenome.Hsapiens.UCSC.hg17 (60)
BSgenome.Hsapiens.UCSC.hg17.masked (40)
BSgenome.Hsapiens.UCSC.hg18 (440)
BSgenome.Hsapiens.UCSC.hg18.masked (49)
BSgenome.Hsapiens.UCSC.hg19 (2252)
BSgenome.Hsapiens.UCSC.hg19.masked (159)
BSgenome.Hsapiens.UCSC.hg38 (4816)
BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major (52)
BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor (51)
BSgenome.Hsapiens.UCSC.hg38.masked (190)
BSgenome.Hsapiens.UCSC.hs1 (38)
BSgenome.Mdomestica.UCSC.monDom5 (30)
BSgenome.Mfascicularis.NCBI.5.0 (76)
BSgenome.Mfascicularis.NCBI.6.0 (31)
BSgenome.Mfuro.UCSC.musFur1 (38)
BSgenome.Mmulatta.UCSC.rheMac10 (71)
BSgenome.Mmulatta.UCSC.rheMac2 (51)
BSgenome.Mmulatta.UCSC.rheMac2.masked (42)
BSgenome.Mmulatta.UCSC.rheMac3 (44)
BSgenome.Mmulatta.UCSC.rheMac3.masked (43)
BSgenome.Mmulatta.UCSC.rheMac8 (39)
BSgenome.Mmusculus.UCSC.mm10 (2300)
BSgenome.Mmusculus.UCSC.mm10.masked (66)
BSgenome.Mmusculus.UCSC.mm39 (1184)
BSgenome.Mmusculus.UCSC.mm6 (0)
BSgenome.Mmusculus.UCSC.mm7 (3)
BSgenome.Mmusculus.UCSC.mm8 (66)
BSgenome.Mmusculus.UCSC.mm8.masked (50)
BSgenome.Mmusculus.UCSC.mm9 (227)
BSgenome.Ppaniscus.UCSC.panPan1 (29)
BSgenome.Ppaniscus.UCSC.panPan2 (29)
BSgenome.Ptroglodytes.UCSC.panTro2 (56)
BSgenome.Ptroglodytes.UCSC.panTro2.masked (41)
BSgenome.Ptroglodytes.UCSC.panTro3 (51)
BSgenome.Ptroglodytes.UCSC.panTro3.masked (40)
BSgenome.Ptroglodytes.UCSC.panTro5 (38)
BSgenome.Ptroglodytes.UCSC.panTro6 (36)
BSgenome.Rnorvegicus.UCSC.rn4 (73)
BSgenome.Rnorvegicus.UCSC.rn4.masked (41)
BSgenome.Rnorvegicus.UCSC.rn5 (147)
BSgenome.Rnorvegicus.UCSC.rn5.masked (46)
BSgenome.Rnorvegicus.UCSC.rn6 (1065)
BSgenome.Rnorvegicus.UCSC.rn7 (55)
BSgenome.Scerevisiae.UCSC.sacCer1 (153)
BSgenome.Scerevisiae.UCSC.sacCer2 (435)
BSgenome.Scerevisiae.UCSC.sacCer3 (185)
BSgenome.Sscrofa.UCSC.susScr11 (50)
BSgenome.Sscrofa.UCSC.susScr3 (48)
BSgenome.Sscrofa.UCSC.susScr3.masked (43)
BSgenome.Tgondii.ToxoDB.7.0 (57)
BSgenome.Tguttata.UCSC.taeGut1 (40)
BSgenome.Tguttata.UCSC.taeGut1.masked (27)
BSgenome.Tguttata.UCSC.taeGut2 (36)
BSgenome.Vvinifera.URGI.IGGP12Xv0 (35)
BSgenome.Vvinifera.URGI.IGGP12Xv2 (37)
hta20sttranscriptcluster.db (9)
hta20transcriptcluster.db (113)
huex10sttranscriptcluster.db (102)
HuExExonProbesetLocationHg18 (51)
HuExExonProbesetLocationHg19 (52)
hugene10sttranscriptcluster.db (652)
hugene11sttranscriptcluster.db (117)
hugene20sttranscriptcluster.db (174)
hugene21sttranscriptcluster.db (99)
illuminaHumanDASLBeadID.db (3)
IlluminaHumanMethylation27k.db (63)
IlluminaHumanMethylation27kanno.ilmn12.hg19 (66)
IlluminaHumanMethylation27kmanifest (61)
IlluminaHumanMethylation450k.db (35)
IlluminaHumanMethylation450kanno.ilmn12.hg19 (1476)
IlluminaHumanMethylation450kannotation.ilmn.v1.2 (5)
IlluminaHumanMethylation450kmanifest (1184)
IlluminaHumanMethylation450kprobe (55)
IlluminaHumanMethylationEPICanno.ilm10b2.hg19 (283)
IlluminaHumanMethylationEPICanno.ilm10b3.hg19 (38)
IlluminaHumanMethylationEPICanno.ilm10b4.hg19 (1193)
IlluminaHumanMethylationEPICmanifest (1103)
IlluminaHumanMethylationEPICv2anno.20a1.hg38 (735)
IlluminaHumanMethylationEPICv2manifest (688)
IlluminaHumanMethylationMSAanno.ilm10a1.hg38 (22)
MafDb.1Kgenomes.phase1.GRCh38 (35)
MafDb.1Kgenomes.phase1.hs37d5 (51)
MafDb.1Kgenomes.phase3.GRCh38 (52)
MafDb.1Kgenomes.phase3.hs37d5 (63)
MafDb.ALL.wgs.phase1.release.v3.20101123 (15)
MafDb.ALL.wgs.phase3.release.v5a.20130502 (7)
MafDb.ALL.wgs.phase3.release.v5b.20130502 (7)
MafDb.ESP6500SI.V2.SSA137.dbSNP138 (7)
MafDb.ESP6500SI.V2.SSA137.GRCh38 (8)
MafDb.ESP6500SI.V2.SSA137.hs37d5 (7)
MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5 (2)
MafDb.ExAC.r0.3.1.snvs.hs37d5 (3)
MafDb.ExAC.r1.0.nonTCGA.GRCh38 (31)
MafDb.ExAC.r1.0.nonTCGA.hs37d5 (53)
MafDb.gnomAD.r2.0.1.GRCh38 (4)
MafDb.gnomAD.r2.0.1.hs37d5 (4)
MafDb.gnomADex.r2.0.1.GRCh38 (5)
MafDb.gnomADex.r2.0.1.hs37d5 (5)
MafDb.gnomADex.r2.1.GRCh38 (29)
MafDb.gnomADex.r2.1.hs37d5 (44)
MafDb.TOPMed.freeze5.hg19 (33)
MafDb.TOPMed.freeze5.hg38 (33)
MafH5.gnomAD.v3.1.1.GRCh38 (5)
MafH5.gnomAD.v3.1.2.GRCh38 (7)
mamurhesusmamuentrezgprobe (1)
Masks.Dmelanogaster.UCSC.dm3 (2)
MeSH.Eco.K12.MG1655.eg.db (18)
MeSH.Eco.O127.H6.E2348.69.eg.db (9)
MeSH.Eco.O157.H7.EDL933.eg.db (9)
MeSH.Eco.O157.H7.Sakai.eg.db (17)
org.MeSH.Eco.K12.MG1655.db (7)
org.MeSH.Eco.O103.H2.12009.db (7)
org.MeSH.Eco.O111.H.11128.db (9)
org.MeSH.Eco.O127.H6.E2348.69.db (7)
org.MeSH.Eco.O157.H7.EC4115.db (8)
org.MeSH.Eco.O157.H7.EDL933.db (8)
org.MeSH.Eco.O157.H7.Sakai.db (8)
org.MeSH.Eco.O157.H7.TW14359.db (6)
org.MeSH.Eco.O26.H11.11368.db (6)
pd.081229.hg18.promoter.medip.hx1 (51)
pd.2006.07.18.hg18.refseq.promoter (49)
pd.2006.07.18.mm8.refseq.promoter (51)
raex10sttranscriptcluster.db (44)
ragene10sttranscriptcluster.db (56)
ragene11sttranscriptcluster.db (54)
ragene20sttranscriptcluster.db (53)
ragene21sttranscriptcluster.db (52)
SNPlocs.Hsapiens.dbSNP.20071016 (5)
SNPlocs.Hsapiens.dbSNP.20080617 (6)
SNPlocs.Hsapiens.dbSNP.20090506 (33)
SNPlocs.Hsapiens.dbSNP.20100427 (31)
SNPlocs.Hsapiens.dbSNP.20101109 (87)
SNPlocs.Hsapiens.dbSNP.20110815 (26)
SNPlocs.Hsapiens.dbSNP.20111119 (26)
SNPlocs.Hsapiens.dbSNP.20120608 (47)
SNPlocs.Hsapiens.dbSNP141.GRCh38 (21)
SNPlocs.Hsapiens.dbSNP142.GRCh37 (50)
SNPlocs.Hsapiens.dbSNP144.GRCh37 (484)
SNPlocs.Hsapiens.dbSNP144.GRCh38 (343)
TxDb.Athaliana.BioMart.plantsmart10 (15)
TxDb.Athaliana.BioMart.plantsmart12 (16)
TxDb.Athaliana.BioMart.plantsmart14 (11)
TxDb.Athaliana.BioMart.plantsmart16 (11)
TxDb.Athaliana.BioMart.plantsmart19 (6)
TxDb.Athaliana.BioMart.plantsmart21 (5)
TxDb.Athaliana.BioMart.plantsmart22 (344)
TxDb.Athaliana.BioMart.plantsmart25 (37)
TxDb.Athaliana.BioMart.plantsmart28 (109)
TxDb.Athaliana.BioMart.plantsmart51 (39)
TxDb.Celegans.UCSC.ce11.ensGene (171)
TxDb.Celegans.UCSC.ce11.refGene (59)
TxDb.Celegans.UCSC.ce6.ensGene (326)
TxDb.Cfamiliaris.UCSC.canFam3.refGene (25)
TxDb.Cfamiliaris.UCSC.canFam4.refGene (19)
TxDb.Cfamiliaris.UCSC.canFam5.refGene (17)
TxDb.Cfamiliaris.UCSC.canFam6.refGene (17)
TxDb.Dmelanogaster.UCSC.dm3.ensGene (766)
TxDb.Dmelanogaster.UCSC.dm6.ensGene (157)
TxDb.Drerio.UCSC.danRer10.refGene (68)
TxDb.Drerio.UCSC.danRer11.refGene (56)
TxDb.Ggallus.UCSC.galGal4.refGene (34)
TxDb.Ggallus.UCSC.galGal5.refGene (42)
TxDb.Ggallus.UCSC.galGal6.refGene (36)
TxDb.Hsapiens.BioMart.igis (38)
TxDb.Hsapiens.UCSC.hg18.knownGene (554)
TxDb.Hsapiens.UCSC.hg19.knownGene (4880)
TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts (188)
TxDb.Hsapiens.UCSC.hg19.refGene (6)
TxDb.Hsapiens.UCSC.hg38.knownGene (2838)
TxDb.Mmulatta.UCSC.rheMac3.refGene (34)
TxDb.Mmulatta.UCSC.rheMac8.refGene (35)
TxDb.Mmusculus.UCSC.mm10.ensGene (187)
TxDb.Mmusculus.UCSC.mm10.knownGene (1518)
TxDb.Mmusculus.UCSC.mm39.knownGene (195)
TxDb.Mmusculus.UCSC.mm39.refGene (104)
TxDb.Mmusculus.UCSC.mm9.knownGene (538)
TxDb.Ptroglodytes.UCSC.panTro4.refGene (32)
TxDb.Ptroglodytes.UCSC.panTro5.refGene (31)
TxDb.Ptroglodytes.UCSC.panTro6.refGene (21)
TxDb.Rnorvegicus.BioMart.igis (37)
TxDb.Rnorvegicus.UCSC.rn4.ensGene (325)
TxDb.Rnorvegicus.UCSC.rn5.refGene (97)
TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq (26)
TxDb.Rnorvegicus.UCSC.rn6.refGene (84)
TxDb.Rnorvegicus.UCSC.rn7.refGene (45)
TxDb.Scerevisiae.UCSC.sacCer2.ensGene (0)
TxDb.Scerevisiae.UCSC.sacCer2.sgdGene (50)
TxDb.Scerevisiae.UCSC.sacCer3.sgdGene (127)