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Revision: 102665
Author: t.kuilman
Date: 2015-04-18T06:47:26+00:00
Paths:
Modified  /trunk/madman/Rpacks/CopywriteR/DESCRIPTION
Merge branch 'master' into remotes/hedgehog - Bumped version number to 3.2
Revision: 102664
Author: t.kuilman
Date: 2015-04-18T06:44:58+00:00
Paths:
Modified  /trunk/madman/Rpacks/CopywriteR/DESCRIPTION
Merge branch 'master' into remotes/hedgehog - Corrected R version dependency II
Revision: 102663
Author: t.kuilman
Date: 2015-04-18T06:42:50+00:00
Paths:
Modified  /trunk/madman/Rpacks/CopywriteR/NEWS
Merge branch 'master' into remotes/hedgehog - corrected R version dependency
Revision: 102662
Author: z.gu
Date: 2015-04-18T05:39:02+00:00
Paths:
Modified  /trunk/madman/Rpacks/ComplexHeatmap/DESCRIPTION
Modified  /trunk/madman/Rpacks/ComplexHeatmap/NAMESPACE
Modified  /trunk/madman/Rpacks/ComplexHeatmap/NEWS
Modified  /trunk/madman/Rpacks/ComplexHeatmap/R/Heatmap-class.R
Modified  /trunk/madman/Rpacks/ComplexHeatmap/R/HeatmapAnnotation-class.R
Modified  /trunk/madman/Rpacks/ComplexHeatmap/R/HeatmapList-class.R
Modified  /trunk/madman/Rpacks/ComplexHeatmap/man/HeatmapAnnotation.rd
Modified  /trunk/madman/Rpacks/ComplexHeatmap/man/add_heatmap-Heatmap-method.rd
Modified  /trunk/madman/Rpacks/ComplexHeatmap/man/add_heatmap-HeatmapAnnotation-method.rd
Modified  /trunk/madman/Rpacks/ComplexHeatmap/man/add_heatmap-HeatmapList-method.rd
Added  /trunk/madman/Rpacks/ComplexHeatmap/man/columnAnnotation.rd
Added  /trunk/madman/Rpacks/ComplexHeatmap/man/rowAnnotation.rd
Modified  /trunk/madman/Rpacks/ComplexHeatmap/vignettes/ComplexHeatmap.Rmd
Commit made by the Bioconductor Git-SVN bridge.

Commit id: 3981fe02c795578b6314576278486fa5f88be6b8

    merge from bioconductor


Commit id: 6811bed29d478afac5e518d7ea40819f5c649212

    change version number


Commit id: 4785016520655b11334a5ea701eeb0b93778f205

    change default value when the matrix has zeor column


Commit id: cf793440d71a2170d50b00564b6464fa92fe650c

    fixed documentations


Commit id: 2fd8ba9a0ebf38c86fbe4eed604d37851e9bd91f

    fixed bug when the heatmap list only contains zero column matrix

Revision: 102661
Author: hpages
Date: 2015-04-18T01:11:38+00:00
Paths:
Modified  /trunk/madman/Rpacks/GenomicAlignments/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomicAlignments/R/readGAlignments.R
After being deprecated in BioC 3.1, the readGAlignment*FromBam() functions are
now defunct. Everybody should use the readGAlignment*() functions instead.
Revision: 102660
Author: hpages
Date: 2015-04-17T23:42:55+00:00
Paths:
Modified  /trunk/madman/Rpacks/IRanges/DESCRIPTION
Modified  /trunk/madman/Rpacks/IRanges/NAMESPACE
Modified  /trunk/madman/Rpacks/IRanges/R/seqapply.R
Modified  /trunk/madman/Rpacks/IRanges/man/seqapply.Rd
Remove seqapply(), mseqapply(), tseqapply(), seqsplit(), and seqby() (were
defunct in BioC 3.1).
Revision: 102658
Author: hpages
Date: 2015-04-17T23:28:23+00:00
Paths:
Modified  /trunk/madman/Rpacks/GenomeInfoDb/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomeInfoDb/NAMESPACE
Modified  /trunk/madman/Rpacks/GenomeInfoDb/R/seqinfo.R
Modified  /trunk/madman/Rpacks/GenomeInfoDb/R/seqlevelsStyle.R
Modified  /trunk/madman/Rpacks/GenomeInfoDb/man/seqlevelsStyle.Rd
Remove seqnameStyle getter and setter (were defunct in BioC 3.1).
Revision: 102657
Author: hpages
Date: 2015-04-17T23:17:36+00:00
Paths:
Modified  /trunk/madman/Rpacks/AnnotationDbi/DESCRIPTION
Modified  /trunk/madman/Rpacks/AnnotationDbi/NAMESPACE
need to import and depend on IRanges
Revision: 102656
Author: hpages
Date: 2015-04-17T23:11:53+00:00
Paths:
Modified  /trunk/madman/Rpacks/AnnotationDbi/DESCRIPTION
Modified  /trunk/madman/Rpacks/AnnotationDbi/NAMESPACE
Deleted  /trunk/madman/Rpacks/AnnotationDbi/R/methods-seqnames.R
Deleted  /trunk/madman/Rpacks/AnnotationDbi/man/defunct.Rd
Remove the "seqnames.db functions" (were defunct in BioC 3.1): testSeqnames,
supportedSeqnameMappings, findSequenceRenamingMaps, supportedSeqnameStyles,
extractSeqnameSet, isSupportedSeqnamesStyle, listAllSupportedStylesBySpecies,
listAllSupportedSeqnameStyles, and supportedSeqnames.
Revision: 102655
Author: hpages
Date: 2015-04-17T22:52:06+00:00
Paths:
Modified  /trunk/madman/Rpacks/BSgenome/R/BSgenome-class.R
Modified  /trunk/madman/Rpacks/BSgenome/R/InjectSNPsHandler-class.R
Modified  /trunk/madman/Rpacks/BSgenome/R/SNPlocs-class.R
Modified  /trunk/madman/Rpacks/BSgenome/R/XtraSNPlocs-class.R
After being deprecated in BioC 3.1, SNPlocs(), snpcount(), and the "species"
methods for SNPlocs and XtraSNPlocs objects, are now defunct.
Revision: 102654
Author: t.kuilman
Date: 2015-04-17T22:46:03+00:00
Paths:
Modified  /trunk/madman/Rpacks/CopywriteR/DESCRIPTION
Modified  /trunk/madman/Rpacks/CopywriteR/NEWS
Modified  /trunk/madman/Rpacks/CopywriteR/man/CopywriteR.Rd
Modified  /trunk/madman/Rpacks/CopywriteR/man/preCopywriteR.Rd
Merge branch 'master' into remotes/hedgehog - Update documentation
Revision: 102653
Author: sdavis2
Date: 2015-04-17T22:41:28+00:00
Paths:
Modified  /trunk/madman/Rpacks/GEOquery/DESCRIPTION
Modified  /trunk/madman/Rpacks/GEOquery/R/getGEO.R
Modified  /trunk/madman/Rpacks/GEOquery/R/parseGEO.R
Modified  /trunk/madman/Rpacks/GEOquery/man/parseGEO.Rd
Commit made by the Bioconductor Git-SVN bridge.

Commit id: bbcc13a8b8f79b9daf83015634efd67a53f082fe

    Version Bump


Commit id: 0f5d2f32004365fc8a980d8519ae3377a5cfa6a2

    Merge branch 'master' of github.com:seandavi/GEOquery


Commit id: d360aa8cf466d73d8f96a06dc5b227a6b0902ff4

    Fixes #8

    This fixes an issue whereby the destdir was not respected
    when a filename was specified for a GSEMatrix file.

Revision: 102651
Author: hpages
Date: 2015-04-17T22:25:26+00:00
Paths:
Modified  /trunk/madman/Rpacks/IRanges/man/NCList-class.Rd
Modified  /trunk/madman/Rpacks/IRanges/man/nearest-methods.Rd
document 'algorithm' argument in nearest-methods.Rd
Revision: 102647
Author: a.stilp
Date: 2015-04-17T21:16:38+00:00
Paths:
Modified  /trunk/madman/Rpacks/GWASTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/GWASTools/R/qqPlot.R
Modified  /trunk/madman/Rpacks/GWASTools/inst/NEWS.Rd
Modified  /trunk/madman/Rpacks/GWASTools/man/qqPlot.Rd
added ci option to remove confidence intervals in qqPlot function
Revision: 102642
Author: hpages
Date: 2015-04-17T18:12:09+00:00
Paths:
Modified  /trunk/madman/Rpacks/IRanges/NEWS
Modified  /trunk/madman/Rpacks/IRanges/man/NCList-class.Rd
fix 2 typos
Revision: 102640
Author: t.kuilman
Date: 2015-04-17T14:22:57+00:00
Paths:
Modified  /trunk/madman/Rpacks/CopywriteR/DESCRIPTION
Merge branch 'master' into remotes/hedgehog - bumped version to 2.1.0
Revision: 102639
Author: t.kuilman
Date: 2015-04-17T14:04:26+00:00
Paths:
Modified  /trunk/madman/Rpacks/CopywriteR/DESCRIPTION
Modified  /trunk/madman/Rpacks/CopywriteR/NEWS
Resolving EAP bug II
Revision: 102638
Author: u.sarkans
Date: 2015-04-17T12:59:41+00:00
Paths:
Modified  /trunk/madman/Rpacks/ArrayExpress/DESCRIPTION
Modified  /trunk/madman/Rpacks/ArrayExpress/R/parseMAGE.r
Maintainer address updated; QT_list URL fixed.
Revision: 102637
Author: mtmorgan
Date: 2015-04-17T12:52:35+00:00
Paths:
Modified  /trunk/madman/Rpacks/AnnotationHubData/DESCRIPTION
Modified  /trunk/madman/Rpacks/AnnotationHubData/R/UCSCTrackUpdateChecker.R
Modified  /trunk/madman/Rpacks/AnnotationHubData/R/makeEnsemblFasta.R
Modified  /trunk/madman/Rpacks/AnnotationHubData/R/makeEnsemblGtfToGRanges.R
Modified  /trunk/madman/Rpacks/AnnotationHubData/R/webAccessFunctions.R
re-use curl handles where possible

- via httr::handle_find()$handle for ftp; httr::GET() for http[s]
Revision: 102635
Author: mtmorgan
Date: 2015-04-17T10:32:24+00:00
Paths:
Modified  /trunk/madman/Rpacks/GSEABase/man/CollectionType-constructors.Rd
update documentation to currently supported gene sets
Revision: 102634
Author: t.kuilman
Date: 2015-04-17T09:58:25+00:00
Paths:
Modified  /trunk/madman/Rpacks/CopywriteR/R/CopywriteR.R
Merge branch 'master' into remotes/hedgehog - resolving EAP bug
Revision: 102633
Author: p.bellot
Date: 2015-04-17T08:32:37+00:00
Paths:
Modified  /trunk/madman/Rpacks/netbenchmark/man/netbenchmark.Rd
- Fixing an error in the documentation
Revision: 102630
Author: hpages
Date: 2015-04-17T06:01:36+00:00
Paths:
Modified  /trunk/madman/Rpacks/IRanges/R/NCList-class.R
NCList() constructor now propagates the metadata columns
Revision: 102629
Author: hpages
Date: 2015-04-17T05:50:08+00:00
Paths:
Modified  /trunk/madman/Rpacks/GenomicRanges/R/GNCList-class.R
GNCList() constructor now propagates the metadata columns
Revision: 102627
Author: mtmorgan
Date: 2015-04-17T05:19:20+00:00
Paths:
Modified  /trunk/madman/Rpacks/GSEABase/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSEABase/NEWS
Modified  /trunk/madman/Rpacks/GSEABase/R/methods-CollectionType.R
support 'h' MSigDB gene set
Revision: 102626
Author: mtmorgan
Date: 2015-04-17T05:18:45+00:00
Paths:
Modified  /trunk/madman/Rpacks/GSEABase/NAMESPACE
clean up NAMESPACE imports
Revision: 102625
Author: d.tenenbaum
Date: 2015-04-17T03:49:03+00:00
Paths:
Modified  /trunk/madman/Rpacks/RGalaxy/DESCRIPTION
add a space.....
Revision: 102624
Author: hpages
Date: 2015-04-17T02:27:20+00:00
Paths:
Modified  /trunk/madman/Rpacks/GenomicRanges/man/GNCList-class.Rd
Modified  /trunk/madman/Rpacks/GenomicRanges/man/findOverlaps-methods.Rd
fix man page issue + add some missing aliases
Revision: 102620
Author: khansen
Date: 2015-04-17T01:52:19+00:00
Paths:
Modified  /trunk/madman/Rpacks/affxparser/DESCRIPTION
Commit made by the Bioconductor Git-SVN bridge.

Commit id: 01918d24e2ee387c424e7f7109530046ec5c4e6e

    Fixed version

Revision: 102619
Author: khansen
Date: 2015-04-17T01:51:50+00:00
Paths:
Modified  /trunk/madman/Rpacks/affxparser/DESCRIPTION
Commit made by the Bioconductor Git-SVN bridge.

Commit id: faacfdebeabbceca90c2217d555a7dbeabacc934

    Date updated

Revision: 102617
Author: hpages
Date: 2015-04-17T01:05:20+00:00
Paths:
Modified  /trunk/madman/Rpacks/IRanges/man/NCList-class.Rd
minor edit
Revision: 102615
Author: hpages
Date: 2015-04-17T00:47:02+00:00
Paths:
Modified  /trunk/madman/Rpacks/IRanges/man/NCList-class.Rd
minor edit
Revision: 102612
Author: hpages
Date: 2015-04-17T00:32:18+00:00
Paths:
Modified  /trunk/madman/Rpacks/IRanges/man/HitsList-class.Rd
add missing aliases
Revision: 102610
Author: hpages
Date: 2015-04-17T00:18:53+00:00
Paths:
Modified  /trunk/madman/Rpacks/IRanges/man/Hits-class-leftovers.Rd
Modified  /trunk/madman/Rpacks/IRanges/man/NCList-class.Rd
Modified  /trunk/madman/Rpacks/IRanges/man/Ranges-class.Rd
Modified  /trunk/madman/Rpacks/IRanges/man/findOverlaps-methods.Rd
some updates findOverlaps-methods.Rd and other man pages
Revision: 102608
Author: i.ihnatova
Date: 2015-04-16T23:33:04+00:00
Paths:
Modified  /trunk/madman/Rpacks/ToPASeq/DESCRIPTION
fixing bugs, improving vignette
Revision: 102606
Author: m.lawrence
Date: 2015-04-16T23:24:09+00:00
Paths:
Modified  /trunk/madman/Rpacks/rtracklayer/DESCRIPTION
Modified  /trunk/madman/Rpacks/rtracklayer/R/ucsc.R
fix export to UCSC when there are no ranges on a seqlevel
Revision: 102604
Author: m.lawrence
Date: 2015-04-16T22:57:12+00:00
Paths:
Modified  /trunk/madman/Rpacks/rtracklayer/DESCRIPTION
Modified  /trunk/madman/Rpacks/rtracklayer/R/bed.R
output '.' in BED when data have '*' for strand, which should be more
consistent with BED conventions
Revision: 102598
Author: hpages
Date: 2015-04-16T21:04:39+00:00
Paths:
Modified  /trunk/madman/Rpacks/IRanges/man/NCList-class.Rd
add \details section to man page for Nested Containment List objects
Revision: 102596
Author: d.tenenbaum
Date: 2015-04-16T20:38:55+00:00
Paths:
Modified  /trunk/madman/Rpacks/BiocInstaller/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiocInstaller/R/zzz.R
Changes associated with 3.1 release.
Revision: 102595
Author: j.storey
Date: 2015-04-16T20:13:59+00:00
Paths:
Modified  /trunk/madman/Rpacks/edge/vignettes/edge.Rnw
Modified  /trunk/madman/Rpacks/edge/vignettes/edgerefs.bib
Updated vignette.
Revision: 102594
Author: d.tenenbaum
Date: 2015-04-16T20:02:44+00:00
Paths:
Modified  /trunk/madman/Rpacks/ABSSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/ABarray/DESCRIPTION
Modified  /trunk/madman/Rpacks/ACME/DESCRIPTION
Modified  /trunk/madman/Rpacks/ADaCGH2/DESCRIPTION
Modified  /trunk/madman/Rpacks/AGDEX/DESCRIPTION
Modified  /trunk/madman/Rpacks/AIMS/DESCRIPTION
Modified  /trunk/madman/Rpacks/ALDEx2/DESCRIPTION
Modified  /trunk/madman/Rpacks/ARRmNormalization/DESCRIPTION
Modified  /trunk/madman/Rpacks/ASEB/DESCRIPTION
Modified  /trunk/madman/Rpacks/ASGSCA/DESCRIPTION
Modified  /trunk/madman/Rpacks/ASSET/DESCRIPTION
Modified  /trunk/madman/Rpacks/ASSIGN/DESCRIPTION
Modified  /trunk/madman/Rpacks/AffyCompatible/DESCRIPTION
Modified  /trunk/madman/Rpacks/AffyExpress/DESCRIPTION
Modified  /trunk/madman/Rpacks/AffyRNADegradation/DESCRIPTION
Modified  /trunk/madman/Rpacks/AffyTiling/DESCRIPTION
Modified  /trunk/madman/Rpacks/AgiMicroRna/DESCRIPTION
Modified  /trunk/madman/Rpacks/AllelicImbalance/DESCRIPTION
Modified  /trunk/madman/Rpacks/AnalysisPageServer/DESCRIPTION
Modified  /trunk/madman/Rpacks/AnnotationDbi/DESCRIPTION
Modified  /trunk/madman/Rpacks/AnnotationForge/DESCRIPTION
Modified  /trunk/madman/Rpacks/AnnotationFuncs/DESCRIPTION
Modified  /trunk/madman/Rpacks/AnnotationHub/DESCRIPTION
Modified  /trunk/madman/Rpacks/ArrayExpress/DESCRIPTION
Modified  /trunk/madman/Rpacks/ArrayExpressHTS/DESCRIPTION
Modified  /trunk/madman/Rpacks/ArrayTV/DESCRIPTION
Modified  /trunk/madman/Rpacks/ArrayTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/AtlasRDF/DESCRIPTION
Modified  /trunk/madman/Rpacks/BAC/DESCRIPTION
Modified  /trunk/madman/Rpacks/BADER/DESCRIPTION
Modified  /trunk/madman/Rpacks/BAGS/DESCRIPTION
Modified  /trunk/madman/Rpacks/BCRANK/DESCRIPTION
Modified  /trunk/madman/Rpacks/BEAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/BEclear/DESCRIPTION
Modified  /trunk/madman/Rpacks/BGmix/DESCRIPTION
Modified  /trunk/madman/Rpacks/BHC/DESCRIPTION
Modified  /trunk/madman/Rpacks/BRAIN/DESCRIPTION
Modified  /trunk/madman/Rpacks/BSgenome/DESCRIPTION
Modified  /trunk/madman/Rpacks/BUS/DESCRIPTION
Modified  /trunk/madman/Rpacks/BaseSpaceR/DESCRIPTION
Modified  /trunk/madman/Rpacks/Basic4Cseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/BayesPeak/DESCRIPTION
Modified  /trunk/madman/Rpacks/BeadDataPackR/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiGGR/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiRewire/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/BicARE/DESCRIPTION
Modified  /trunk/madman/Rpacks/BioMVCClass/DESCRIPTION
Modified  /trunk/madman/Rpacks/BioNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/BioSeqClass/DESCRIPTION
Modified  /trunk/madman/Rpacks/Biobase/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiocCaseStudies/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiocCheck/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiocGenerics/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiocInstaller/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiocParallel/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiocStyle/DESCRIPTION
Modified  /trunk/madman/Rpacks/Biostrings/DESCRIPTION
Modified  /trunk/madman/Rpacks/BitSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/BrainStars/DESCRIPTION
Modified  /trunk/madman/Rpacks/BridgeDbR/DESCRIPTION
Modified  /trunk/madman/Rpacks/BrowserViz/DESCRIPTION
Modified  /trunk/madman/Rpacks/BrowserVizDemo/DESCRIPTION
Modified  /trunk/madman/Rpacks/BubbleTree/DESCRIPTION
Modified  /trunk/madman/Rpacks/BufferedMatrix/DESCRIPTION
Modified  /trunk/madman/Rpacks/BufferedMatrixMethods/DESCRIPTION
Modified  /trunk/madman/Rpacks/CAFE/DESCRIPTION
Modified  /trunk/madman/Rpacks/CAGEr/DESCRIPTION
Modified  /trunk/madman/Rpacks/CALIB/DESCRIPTION
Modified  /trunk/madman/Rpacks/CAMERA/DESCRIPTION
Modified  /trunk/madman/Rpacks/CAnD/DESCRIPTION
Modified  /trunk/madman/Rpacks/CFAssay/DESCRIPTION
Modified  /trunk/madman/Rpacks/CGEN/DESCRIPTION
Modified  /trunk/madman/Rpacks/CGHbase/DESCRIPTION
Modified  /trunk/madman/Rpacks/CGHcall/DESCRIPTION
Modified  /trunk/madman/Rpacks/CGHnormaliter/DESCRIPTION
Modified  /trunk/madman/Rpacks/CGHregions/DESCRIPTION
Modified  /trunk/madman/Rpacks/CMA/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNAnorm/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNEr/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNORdt/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNORfeeder/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNORfuzzy/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNORode/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNVrd2/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNVtools/DESCRIPTION
Modified  /trunk/madman/Rpacks/CODEX/DESCRIPTION
Modified  /trunk/madman/Rpacks/COHCAP/DESCRIPTION
Modified  /trunk/madman/Rpacks/COMPASS/DESCRIPTION
Modified  /trunk/madman/Rpacks/CORREP/DESCRIPTION
Modified  /trunk/madman/Rpacks/COSNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/CRISPRseek/DESCRIPTION
Modified  /trunk/madman/Rpacks/CRImage/DESCRIPTION
Modified  /trunk/madman/Rpacks/CSAR/DESCRIPTION
Modified  /trunk/madman/Rpacks/CSSP/DESCRIPTION
Modified  /trunk/madman/Rpacks/CancerMutationAnalysis/DESCRIPTION
Modified  /trunk/madman/Rpacks/Cardinal/DESCRIPTION
Modified  /trunk/madman/Rpacks/Category/DESCRIPTION
Modified  /trunk/madman/Rpacks/CellNOptR/DESCRIPTION
Modified  /trunk/madman/Rpacks/CexoR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChAMP/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChIPQC/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChIPXpress/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChIPpeakAnno/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChIPseeker/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChIPseqR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChIPsim/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChemmineOB/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChemmineR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChromHeatMap/DESCRIPTION
Modified  /trunk/madman/Rpacks/ClassifyR/DESCRIPTION
Modified  /trunk/madman/Rpacks/Clomial/DESCRIPTION
Modified  /trunk/madman/Rpacks/Clonality/DESCRIPTION
Modified  /trunk/madman/Rpacks/CoCiteStats/DESCRIPTION
Modified  /trunk/madman/Rpacks/CoGAPS/DESCRIPTION
Modified  /trunk/madman/Rpacks/CoRegNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/CompGO/DESCRIPTION
Modified  /trunk/madman/Rpacks/ComplexHeatmap/DESCRIPTION
Modified  /trunk/madman/Rpacks/ConsensusClusterPlus/DESCRIPTION
Modified  /trunk/madman/Rpacks/CopyNumber450k/DESCRIPTION
Modified  /trunk/madman/Rpacks/CopywriteR/DESCRIPTION
Modified  /trunk/madman/Rpacks/CorMut/DESCRIPTION
Modified  /trunk/madman/Rpacks/Cormotif/DESCRIPTION
Modified  /trunk/madman/Rpacks/CoverageView/DESCRIPTION
Modified  /trunk/madman/Rpacks/DART/DESCRIPTION
Modified  /trunk/madman/Rpacks/DASiR/DESCRIPTION
Modified  /trunk/madman/Rpacks/DAVIDQuery/DESCRIPTION
Modified  /trunk/madman/Rpacks/DBChIP/DESCRIPTION
Modified  /trunk/madman/Rpacks/DECIPHER/DESCRIPTION
Modified  /trunk/madman/Rpacks/DEDS/DESCRIPTION
Modified  /trunk/madman/Rpacks/DEGraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/DEGreport/DESCRIPTION
Modified  /trunk/madman/Rpacks/DEGseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/DESeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/DESeq2/DESCRIPTION
Modified  /trunk/madman/Rpacks/DEXSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/DFP/DESCRIPTION
Modified  /trunk/madman/Rpacks/DMRcaller/DESCRIPTION
Modified  /trunk/madman/Rpacks/DMRcate/DESCRIPTION
Modified  /trunk/madman/Rpacks/DMRforPairs/DESCRIPTION
Modified  /trunk/madman/Rpacks/DNAcopy/DESCRIPTION
Modified  /trunk/madman/Rpacks/DOQTL/DESCRIPTION
Modified  /trunk/madman/Rpacks/DOSE/DESCRIPTION
Modified  /trunk/madman/Rpacks/DSS/DESCRIPTION
Modified  /trunk/madman/Rpacks/DTA/DESCRIPTION
Modified  /trunk/madman/Rpacks/DeconRNASeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/DiffBind/DESCRIPTION
Modified  /trunk/madman/Rpacks/DirichletMultinomial/DESCRIPTION
Modified  /trunk/madman/Rpacks/DriverNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/DrugVsDisease/DESCRIPTION
Modified  /trunk/madman/Rpacks/DupChecker/DESCRIPTION
Modified  /trunk/madman/Rpacks/DynDoc/DESCRIPTION
Modified  /trunk/madman/Rpacks/EBImage/DESCRIPTION
Modified  /trunk/madman/Rpacks/EBSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/EBSeqHMM/DESCRIPTION
Modified  /trunk/madman/Rpacks/EBarrays/DESCRIPTION
Modified  /trunk/madman/Rpacks/EBcoexpress/DESCRIPTION
Modified  /trunk/madman/Rpacks/EDASeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/EDDA/DESCRIPTION
Modified  /trunk/madman/Rpacks/ELBOW/DESCRIPTION
Modified  /trunk/madman/Rpacks/EMDomics/DESCRIPTION
Modified  /trunk/madman/Rpacks/ENCODExplorer/DESCRIPTION
Modified  /trunk/madman/Rpacks/ENVISIONQuery/DESCRIPTION
Modified  /trunk/madman/Rpacks/ENmix/DESCRIPTION
Modified  /trunk/madman/Rpacks/EasyqpcR/DESCRIPTION
Modified  /trunk/madman/Rpacks/EnrichmentBrowser/DESCRIPTION
Modified  /trunk/madman/Rpacks/ExiMiR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ExpressionView/DESCRIPTION
Modified  /trunk/madman/Rpacks/FEM/DESCRIPTION
Modified  /trunk/madman/Rpacks/FGNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/FISHalyseR/DESCRIPTION
Modified  /trunk/madman/Rpacks/FRGEpistasis/DESCRIPTION
Modified  /trunk/madman/Rpacks/FlowRepositoryR/DESCRIPTION
Modified  /trunk/madman/Rpacks/FlowSOM/DESCRIPTION
Modified  /trunk/madman/Rpacks/FourCSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/FunciSNP/DESCRIPTION
Modified  /trunk/madman/Rpacks/GENE.E/DESCRIPTION
Modified  /trunk/madman/Rpacks/GENESIS/DESCRIPTION
Modified  /trunk/madman/Rpacks/GEOmetadb/DESCRIPTION
Modified  /trunk/madman/Rpacks/GEOquery/DESCRIPTION
Modified  /trunk/madman/Rpacks/GEOsubmission/DESCRIPTION
Modified  /trunk/madman/Rpacks/GEWIST/DESCRIPTION
Modified  /trunk/madman/Rpacks/GGBase/DESCRIPTION
Modified  /trunk/madman/Rpacks/GGtools/DESCRIPTION
Modified  /trunk/madman/Rpacks/GLAD/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOFunction/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOSemSim/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOSim/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOTHiC/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOexpress/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOstats/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOsummaries/DESCRIPTION
Modified  /trunk/madman/Rpacks/GRENITS/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSAR/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSCA/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSEABase/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSEAlm/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSRI/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSReg/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSVA/DESCRIPTION
Modified  /trunk/madman/Rpacks/GWASTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneAnswers/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneExpressionSignature/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneGA/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneMeta/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneNetworkBuilder/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneOverlap/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneRegionScan/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneSelectMMD/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneSelector/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneticsDesign/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneticsPed/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenoView/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomeGraphs/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomeInfoDb/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomicAlignments/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomicFeatures/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomicFiles/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomicInteractions/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomicRanges/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomicTuples/DESCRIPTION
Modified  /trunk/madman/Rpacks/Genominator/DESCRIPTION
Modified  /trunk/madman/Rpacks/GlobalAncova/DESCRIPTION
Modified  /trunk/madman/Rpacks/GoogleGenomics/DESCRIPTION
Modified  /trunk/madman/Rpacks/GraphAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/GraphAlignment/DESCRIPTION
Modified  /trunk/madman/Rpacks/GraphPAC/DESCRIPTION
Modified  /trunk/madman/Rpacks/GreyListChIP/DESCRIPTION
Modified  /trunk/madman/Rpacks/Gviz/DESCRIPTION
Modified  /trunk/madman/Rpacks/HCsnip/DESCRIPTION
Modified  /trunk/madman/Rpacks/HDTD/DESCRIPTION
Modified  /trunk/madman/Rpacks/HELP/DESCRIPTION
Modified  /trunk/madman/Rpacks/HEM/DESCRIPTION
Modified  /trunk/madman/Rpacks/HIBAG/DESCRIPTION
Modified  /trunk/madman/Rpacks/HMMcopy/DESCRIPTION
Modified  /trunk/madman/Rpacks/HTSFilter/DESCRIPTION
Modified  /trunk/madman/Rpacks/HTSanalyzeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/HTSeqGenie/DESCRIPTION
Modified  /trunk/madman/Rpacks/HTqPCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/Harshlight/DESCRIPTION
Modified  /trunk/madman/Rpacks/Heatplus/DESCRIPTION
Modified  /trunk/madman/Rpacks/HiTC/DESCRIPTION
Modified  /trunk/madman/Rpacks/HilbertVis/DESCRIPTION
Modified  /trunk/madman/Rpacks/HilbertVisGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/HybridMTest/DESCRIPTION
Modified  /trunk/madman/Rpacks/IMPCdata/DESCRIPTION
Modified  /trunk/madman/Rpacks/INPower/DESCRIPTION
Modified  /trunk/madman/Rpacks/IPPD/DESCRIPTION
Modified  /trunk/madman/Rpacks/IRanges/DESCRIPTION
Modified  /trunk/madman/Rpacks/ITALICS/DESCRIPTION
Modified  /trunk/madman/Rpacks/IVAS/DESCRIPTION
Modified  /trunk/madman/Rpacks/Icens/DESCRIPTION
Modified  /trunk/madman/Rpacks/IdMappingAnalysis/DESCRIPTION
Modified  /trunk/madman/Rpacks/IdMappingRetrieval/DESCRIPTION
Modified  /trunk/madman/Rpacks/IdeoViz/DESCRIPTION
Modified  /trunk/madman/Rpacks/InPAS/DESCRIPTION
Modified  /trunk/madman/Rpacks/IsoGeneGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/KCsmart/DESCRIPTION
Modified  /trunk/madman/Rpacks/KEGGREST/DESCRIPTION
Modified  /trunk/madman/Rpacks/KEGGgraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/KEGGprofile/DESCRIPTION
Modified  /trunk/madman/Rpacks/LBE/DESCRIPTION
Modified  /trunk/madman/Rpacks/LEA/DESCRIPTION
Modified  /trunk/madman/Rpacks/LMGene/DESCRIPTION
Modified  /trunk/madman/Rpacks/LPE/DESCRIPTION
Modified  /trunk/madman/Rpacks/LPEadj/DESCRIPTION
Modified  /trunk/madman/Rpacks/LVSmiRNA/DESCRIPTION
Modified  /trunk/madman/Rpacks/LiquidAssociation/DESCRIPTION
Modified  /trunk/madman/Rpacks/LowMACA/DESCRIPTION
Modified  /trunk/madman/Rpacks/M3D/DESCRIPTION
Modified  /trunk/madman/Rpacks/MAIT/DESCRIPTION
Modified  /trunk/madman/Rpacks/MANOR/DESCRIPTION
Modified  /trunk/madman/Rpacks/MBASED/DESCRIPTION
Modified  /trunk/madman/Rpacks/MBAmethyl/DESCRIPTION
Modified  /trunk/madman/Rpacks/MBCB/DESCRIPTION
Modified  /trunk/madman/Rpacks/MCRestimate/DESCRIPTION
Modified  /trunk/madman/Rpacks/MEDIPS/DESCRIPTION
Modified  /trunk/madman/Rpacks/MEDME/DESCRIPTION
Modified  /trunk/madman/Rpacks/MEIGOR/DESCRIPTION
Modified  /trunk/madman/Rpacks/MGFM/DESCRIPTION
Modified  /trunk/madman/Rpacks/MIMOSA/DESCRIPTION
Modified  /trunk/madman/Rpacks/MLInterfaces/DESCRIPTION
Modified  /trunk/madman/Rpacks/MLP/DESCRIPTION
Modified  /trunk/madman/Rpacks/MLSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/MMDiff/DESCRIPTION
Modified  /trunk/madman/Rpacks/MPFE/DESCRIPTION
Modified  /trunk/madman/Rpacks/MSGFgui/DESCRIPTION
Modified  /trunk/madman/Rpacks/MSGFplus/DESCRIPTION
Modified  /trunk/madman/Rpacks/MSnID/DESCRIPTION
Modified  /trunk/madman/Rpacks/MSnbase/DESCRIPTION
Modified  /trunk/madman/Rpacks/MSstats/DESCRIPTION
Modified  /trunk/madman/Rpacks/MVCClass/DESCRIPTION
Modified  /trunk/madman/Rpacks/MantelCorr/DESCRIPTION
Modified  /trunk/madman/Rpacks/MassArray/DESCRIPTION
Modified  /trunk/madman/Rpacks/MassSpecWavelet/DESCRIPTION
Modified  /trunk/madman/Rpacks/MatrixRider/DESCRIPTION
Modified  /trunk/madman/Rpacks/MeSHDbi/DESCRIPTION
Modified  /trunk/madman/Rpacks/MeSHSim/DESCRIPTION
Modified  /trunk/madman/Rpacks/MeasurementError.cor/DESCRIPTION
Modified  /trunk/madman/Rpacks/MergeMaid/DESCRIPTION
Modified  /trunk/madman/Rpacks/Metab/DESCRIPTION
Modified  /trunk/madman/Rpacks/MethTargetedNGS/DESCRIPTION
Modified  /trunk/madman/Rpacks/MethylAid/DESCRIPTION
Modified  /trunk/madman/Rpacks/MethylMix/DESCRIPTION
Modified  /trunk/madman/Rpacks/MethylSeekR/DESCRIPTION
Modified  /trunk/madman/Rpacks/Mfuzz/DESCRIPTION
Modified  /trunk/madman/Rpacks/MiChip/DESCRIPTION
Modified  /trunk/madman/Rpacks/MiPP/DESCRIPTION
Modified  /trunk/madman/Rpacks/MiRaGE/DESCRIPTION
Modified  /trunk/madman/Rpacks/MineICA/DESCRIPTION
Modified  /trunk/madman/Rpacks/MinimumDistance/DESCRIPTION
Modified  /trunk/madman/Rpacks/Mirsynergy/DESCRIPTION
Modified  /trunk/madman/Rpacks/MmPalateMiRNA/DESCRIPTION
Modified  /trunk/madman/Rpacks/MoPS/DESCRIPTION
Modified  /trunk/madman/Rpacks/MotIV/DESCRIPTION
Modified  /trunk/madman/Rpacks/MotifDb/DESCRIPTION
Modified  /trunk/madman/Rpacks/Mulcom/DESCRIPTION
Modified  /trunk/madman/Rpacks/MultiMed/DESCRIPTION
Modified  /trunk/madman/Rpacks/NCIgraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/NGScopy/DESCRIPTION
Modified  /trunk/madman/Rpacks/NOISeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/NTW/DESCRIPTION
Modified  /trunk/madman/Rpacks/NanoStringQCPro/DESCRIPTION
Modified  /trunk/madman/Rpacks/NarrowPeaks/DESCRIPTION
Modified  /trunk/madman/Rpacks/NetPathMiner/DESCRIPTION
Modified  /trunk/madman/Rpacks/NetSAM/DESCRIPTION
Modified  /trunk/madman/Rpacks/NormqPCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/NuPoP/DESCRIPTION
Modified  /trunk/madman/Rpacks/OCplus/DESCRIPTION
Modified  /trunk/madman/Rpacks/OLIN/DESCRIPTION
Modified  /trunk/madman/Rpacks/OLINgui/DESCRIPTION
Modified  /trunk/madman/Rpacks/OSAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/OTUbase/DESCRIPTION
Modified  /trunk/madman/Rpacks/OmicCircos/DESCRIPTION
Modified  /trunk/madman/Rpacks/OmicsMarkeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/OncoSimulR/DESCRIPTION
Modified  /trunk/madman/Rpacks/OrderedList/DESCRIPTION
Modified  /trunk/madman/Rpacks/OrganismDbi/DESCRIPTION
Modified  /trunk/madman/Rpacks/OutlierD/DESCRIPTION
Modified  /trunk/madman/Rpacks/PAA/DESCRIPTION
Modified  /trunk/madman/Rpacks/PADOG/DESCRIPTION
Modified  /trunk/madman/Rpacks/PANR/DESCRIPTION
Modified  /trunk/madman/Rpacks/PAPi/DESCRIPTION
Modified  /trunk/madman/Rpacks/PAnnBuilder/DESCRIPTION
Modified  /trunk/madman/Rpacks/PCpheno/DESCRIPTION
Modified  /trunk/madman/Rpacks/PECA/DESCRIPTION
Modified  /trunk/madman/Rpacks/PGSEA/DESCRIPTION
Modified  /trunk/madman/Rpacks/PICS/DESCRIPTION
Modified  /trunk/madman/Rpacks/PING/DESCRIPTION
Modified  /trunk/madman/Rpacks/PLPE/DESCRIPTION
Modified  /trunk/madman/Rpacks/PREDA/DESCRIPTION
Modified  /trunk/madman/Rpacks/PROMISE/DESCRIPTION
Modified  /trunk/madman/Rpacks/PROPER/DESCRIPTION
Modified  /trunk/madman/Rpacks/PROcess/DESCRIPTION
Modified  /trunk/madman/Rpacks/PSEA/DESCRIPTION
Modified  /trunk/madman/Rpacks/PSICQUIC/DESCRIPTION
Modified  /trunk/madman/Rpacks/PWMEnrich/DESCRIPTION
Modified  /trunk/madman/Rpacks/PathNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/Pbase/DESCRIPTION
Modified  /trunk/madman/Rpacks/PhenStat/DESCRIPTION
Modified  /trunk/madman/Rpacks/Polyfit/DESCRIPTION
Modified  /trunk/madman/Rpacks/ProCoNA/DESCRIPTION
Modified  /trunk/madman/Rpacks/ProtGenerics/DESCRIPTION
Modified  /trunk/madman/Rpacks/Pviz/DESCRIPTION
Modified  /trunk/madman/Rpacks/QDNAseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/QUALIFIER/DESCRIPTION
Modified  /trunk/madman/Rpacks/QuartPAC/DESCRIPTION
Modified  /trunk/madman/Rpacks/QuasR/DESCRIPTION
Modified  /trunk/madman/Rpacks/R3CPET/DESCRIPTION
Modified  /trunk/madman/Rpacks/R453Plus1Toolbox/DESCRIPTION
Modified  /trunk/madman/Rpacks/RBGL/DESCRIPTION
Modified  /trunk/madman/Rpacks/RBM/DESCRIPTION
Modified  /trunk/madman/Rpacks/RBioinf/DESCRIPTION
Modified  /trunk/madman/Rpacks/RCASPAR/DESCRIPTION
Modified  /trunk/madman/Rpacks/RCyjs/DESCRIPTION
Modified  /trunk/madman/Rpacks/RCytoscape/DESCRIPTION
Modified  /trunk/madman/Rpacks/RDAVIDWebService/DESCRIPTION
Modified  /trunk/madman/Rpacks/RDRToolbox/DESCRIPTION
Modified  /trunk/madman/Rpacks/REDseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/RGSEA/DESCRIPTION
Modified  /trunk/madman/Rpacks/RGalaxy/DESCRIPTION
Modified  /trunk/madman/Rpacks/RIPSeeker/DESCRIPTION
Modified  /trunk/madman/Rpacks/RLMM/DESCRIPTION
Modified  /trunk/madman/Rpacks/RMassBank/DESCRIPTION
Modified  /trunk/madman/Rpacks/RNASeqPower/DESCRIPTION
Modified  /trunk/madman/Rpacks/RNAinteract/DESCRIPTION
Modified  /trunk/madman/Rpacks/RNAither/DESCRIPTION
Modified  /trunk/madman/Rpacks/RNAprobR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ROC/DESCRIPTION
Modified  /trunk/madman/Rpacks/ROntoTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/RPA/DESCRIPTION
Modified  /trunk/madman/Rpacks/RRHO/DESCRIPTION
Modified  /trunk/madman/Rpacks/RSVSim/DESCRIPTION
Modified  /trunk/madman/Rpacks/RTCA/DESCRIPTION
Modified  /trunk/madman/Rpacks/RTN/DESCRIPTION
Modified  /trunk/madman/Rpacks/RTopper/DESCRIPTION
Modified  /trunk/madman/Rpacks/RUVSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/RUVcorr/DESCRIPTION
Modified  /trunk/madman/Rpacks/RUVnormalize/DESCRIPTION
Modified  /trunk/madman/Rpacks/RWebServices/DESCRIPTION
Modified  /trunk/madman/Rpacks/RamiGO/DESCRIPTION
Modified  /trunk/madman/Rpacks/RankProd/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rariant/DESCRIPTION
Modified  /trunk/madman/Rpacks/RbcBook1/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rbowtie/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rcade/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rchemcpp/DESCRIPTION
Modified  /trunk/madman/Rpacks/RchyOptimyx/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rcpi/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rdisop/DESCRIPTION
Modified  /trunk/madman/Rpacks/ReQON/DESCRIPTION
Modified  /trunk/madman/Rpacks/ReactomePA/DESCRIPTION
Modified  /trunk/madman/Rpacks/ReadqPCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/RedeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/RefNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/RefPlus/DESCRIPTION
Modified  /trunk/madman/Rpacks/Repitools/DESCRIPTION
Modified  /trunk/madman/Rpacks/ReportingTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rgraphviz/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rhtslib/DESCRIPTION
Modified  /trunk/madman/Rpacks/Ringo/DESCRIPTION
Modified  /trunk/madman/Rpacks/Risa/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rmagpie/DESCRIPTION
Modified  /trunk/madman/Rpacks/RmiR/DESCRIPTION
Modified  /trunk/madman/Rpacks/RnBeads/DESCRIPTION
Modified  /trunk/madman/Rpacks/RnaSeqSampleSize/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rnits/DESCRIPTION
Modified  /trunk/madman/Rpacks/Roleswitch/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rolexa/DESCRIPTION
Modified  /trunk/madman/Rpacks/RpsiXML/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rqc/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rsamtools/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rsubread/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rtreemix/DESCRIPTION
Modified  /trunk/madman/Rpacks/S4Vectors/DESCRIPTION
Modified  /trunk/madman/Rpacks/SAGx/DESCRIPTION
Modified  /trunk/madman/Rpacks/SANTA/DESCRIPTION
Modified  /trunk/madman/Rpacks/SBMLR/DESCRIPTION
Modified  /trunk/madman/Rpacks/SCAN.UPC/DESCRIPTION
Modified  /trunk/madman/Rpacks/SELEX/DESCRIPTION
Modified  /trunk/madman/Rpacks/SGSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/SIM/DESCRIPTION
Modified  /trunk/madman/Rpacks/SIMAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/SJava/DESCRIPTION
Modified  /trunk/madman/Rpacks/SLGI/DESCRIPTION
Modified  /trunk/madman/Rpacks/SLqPCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/SMAP/DESCRIPTION
Modified  /trunk/madman/Rpacks/SNAGEE/DESCRIPTION
Modified  /trunk/madman/Rpacks/SNPRelate/DESCRIPTION
Modified  /trunk/madman/Rpacks/SNPchip/DESCRIPTION
Modified  /trunk/madman/Rpacks/SPEM/DESCRIPTION
Modified  /trunk/madman/Rpacks/SPIA/DESCRIPTION
Modified  /trunk/madman/Rpacks/SQUADD/DESCRIPTION
Modified  /trunk/madman/Rpacks/SRAdb/DESCRIPTION
Modified  /trunk/madman/Rpacks/SSPA/DESCRIPTION
Modified  /trunk/madman/Rpacks/STAN/DESCRIPTION
Modified  /trunk/madman/Rpacks/STATegRa/DESCRIPTION
Modified  /trunk/madman/Rpacks/STRINGdb/DESCRIPTION
Modified  /trunk/madman/Rpacks/SVM2CRM/DESCRIPTION
Modified  /trunk/madman/Rpacks/SamSPECTRAL/DESCRIPTION
Modified  /trunk/madman/Rpacks/ScISI/DESCRIPTION
Modified  /trunk/madman/Rpacks/SemDist/DESCRIPTION
Modified  /trunk/madman/Rpacks/SeqArray/DESCRIPTION
Modified  /trunk/madman/Rpacks/SeqGSEA/DESCRIPTION
Modified  /trunk/madman/Rpacks/SeqVarTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/ShortRead/DESCRIPTION
Modified  /trunk/madman/Rpacks/SigCheck/DESCRIPTION
Modified  /trunk/madman/Rpacks/SigFuge/DESCRIPTION
Modified  /trunk/madman/Rpacks/SimBindProfiles/DESCRIPTION
Modified  /trunk/madman/Rpacks/SomatiCA/DESCRIPTION
Modified  /trunk/madman/Rpacks/SomaticSignatures/DESCRIPTION
Modified  /trunk/madman/Rpacks/SpacePAC/DESCRIPTION
Modified  /trunk/madman/Rpacks/SpeCond/DESCRIPTION
Modified  /trunk/madman/Rpacks/SplicingGraphs/DESCRIPTION
Modified  /trunk/madman/Rpacks/Starr/DESCRIPTION
Modified  /trunk/madman/Rpacks/Streamer/DESCRIPTION
Modified  /trunk/madman/Rpacks/Sushi/DESCRIPTION
Modified  /trunk/madman/Rpacks/SwimR/DESCRIPTION
Modified  /trunk/madman/Rpacks/TCC/DESCRIPTION
Modified  /trunk/madman/Rpacks/TDARACNE/DESCRIPTION
Modified  /trunk/madman/Rpacks/TEQC/DESCRIPTION
Modified  /trunk/madman/Rpacks/TFBSTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/TIN/DESCRIPTION
Modified  /trunk/madman/Rpacks/TPP/DESCRIPTION
Modified  /trunk/madman/Rpacks/TRONCO/DESCRIPTION
Modified  /trunk/madman/Rpacks/TSCAN/DESCRIPTION
Modified  /trunk/madman/Rpacks/TSSi/DESCRIPTION
Modified  /trunk/madman/Rpacks/TargetScore/DESCRIPTION
Modified  /trunk/madman/Rpacks/TargetSearch/DESCRIPTION
Modified  /trunk/madman/Rpacks/TitanCNA/DESCRIPTION
Modified  /trunk/madman/Rpacks/ToPASeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/TransView/DESCRIPTION
Modified  /trunk/madman/Rpacks/TurboNorm/DESCRIPTION
Modified  /trunk/madman/Rpacks/TypeInfo/DESCRIPTION
Modified  /trunk/madman/Rpacks/UNDO/DESCRIPTION
Modified  /trunk/madman/Rpacks/UniProt.ws/DESCRIPTION
Modified  /trunk/madman/Rpacks/VanillaICE/DESCRIPTION
Modified  /trunk/madman/Rpacks/VariantAnnotation/DESCRIPTION
Modified  /trunk/madman/Rpacks/VariantFiltering/DESCRIPTION
Modified  /trunk/madman/Rpacks/VariantTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/Vega/DESCRIPTION
Modified  /trunk/madman/Rpacks/VegaMC/DESCRIPTION
Modified  /trunk/madman/Rpacks/XDE/DESCRIPTION
Modified  /trunk/madman/Rpacks/XVector/DESCRIPTION
Modified  /trunk/madman/Rpacks/a4/DESCRIPTION
Modified  /trunk/madman/Rpacks/a4Base/DESCRIPTION
Modified  /trunk/madman/Rpacks/a4Classif/DESCRIPTION
Modified  /trunk/madman/Rpacks/a4Core/DESCRIPTION
Modified  /trunk/madman/Rpacks/a4Preproc/DESCRIPTION
Modified  /trunk/madman/Rpacks/a4Reporting/DESCRIPTION
Modified  /trunk/madman/Rpacks/aCGH/DESCRIPTION
Modified  /trunk/madman/Rpacks/adSplit/DESCRIPTION
Modified  /trunk/madman/Rpacks/affxparser/DESCRIPTION
Modified  /trunk/madman/Rpacks/affy/DESCRIPTION
Modified  /trunk/madman/Rpacks/affyContam/DESCRIPTION
Modified  /trunk/madman/Rpacks/affyILM/DESCRIPTION
Modified  /trunk/madman/Rpacks/affyPLM/DESCRIPTION
Modified  /trunk/madman/Rpacks/affyPara/DESCRIPTION
Modified  /trunk/madman/Rpacks/affyQCReport/DESCRIPTION
Modified  /trunk/madman/Rpacks/affycomp/DESCRIPTION
Modified  /trunk/madman/Rpacks/affycoretools/DESCRIPTION
Modified  /trunk/madman/Rpacks/affyio/DESCRIPTION
Modified  /trunk/madman/Rpacks/affylmGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/affypdnn/DESCRIPTION
Modified  /trunk/madman/Rpacks/agilp/DESCRIPTION
Modified  /trunk/madman/Rpacks/alsace/DESCRIPTION
Modified  /trunk/madman/Rpacks/altcdfenvs/DESCRIPTION
Modified  /trunk/madman/Rpacks/ampliQueso/DESCRIPTION
Modified  /trunk/madman/Rpacks/annaffy/DESCRIPTION
Modified  /trunk/madman/Rpacks/annmap/DESCRIPTION
Modified  /trunk/madman/Rpacks/annotate/DESCRIPTION
Modified  /trunk/madman/Rpacks/annotationTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/anota/DESCRIPTION
Modified  /trunk/madman/Rpacks/antiProfiles/DESCRIPTION
Modified  /trunk/madman/Rpacks/apComplex/DESCRIPTION
Modified  /trunk/madman/Rpacks/aroma.light/DESCRIPTION
Modified  /trunk/madman/Rpacks/arrayMvout/DESCRIPTION
Modified  /trunk/madman/Rpacks/arrayQuality/DESCRIPTION
Modified  /trunk/madman/Rpacks/arrayQualityMetrics/DESCRIPTION
Modified  /trunk/madman/Rpacks/attract/DESCRIPTION
Modified  /trunk/madman/Rpacks/ballgown/DESCRIPTION
Modified  /trunk/madman/Rpacks/bamsignals/DESCRIPTION
Modified  /trunk/madman/Rpacks/baySeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/beadarray/DESCRIPTION
Modified  /trunk/madman/Rpacks/beadarraySNP/DESCRIPTION
Modified  /trunk/madman/Rpacks/betr/DESCRIPTION
Modified  /trunk/madman/Rpacks/bgafun/DESCRIPTION
Modified  /trunk/madman/Rpacks/bgx/DESCRIPTION
Modified  /trunk/madman/Rpacks/bigmemoryExtras/DESCRIPTION
Modified  /trunk/madman/Rpacks/bioDist/DESCRIPTION
Modified  /trunk/madman/Rpacks/bioassayR/DESCRIPTION
Modified  /trunk/madman/Rpacks/biocGraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/biocViews/DESCRIPTION
Modified  /trunk/madman/Rpacks/biomaRt/DESCRIPTION
Modified  /trunk/madman/Rpacks/biomvRCNS/DESCRIPTION
Modified  /trunk/madman/Rpacks/biosvd/DESCRIPTION
Modified  /trunk/madman/Rpacks/biovizBase/DESCRIPTION
Modified  /trunk/madman/Rpacks/birta/DESCRIPTION
Modified  /trunk/madman/Rpacks/birte/DESCRIPTION
Modified  /trunk/madman/Rpacks/blima/DESCRIPTION
Modified  /trunk/madman/Rpacks/bridge/DESCRIPTION
Modified  /trunk/madman/Rpacks/bsseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/bumphunter/DESCRIPTION
Modified  /trunk/madman/Rpacks/canceR/DESCRIPTION
Modified  /trunk/madman/Rpacks/cancerclass/DESCRIPTION
Modified  /trunk/madman/Rpacks/casper/DESCRIPTION
Modified  /trunk/madman/Rpacks/categoryCompare/DESCRIPTION
Modified  /trunk/madman/Rpacks/ccrepe/DESCRIPTION
Modified  /trunk/madman/Rpacks/cellGrowth/DESCRIPTION
Modified  /trunk/madman/Rpacks/cellHTS/DESCRIPTION
Modified  /trunk/madman/Rpacks/cellHTS2/DESCRIPTION
Modified  /trunk/madman/Rpacks/cghMCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/charm/DESCRIPTION
Modified  /trunk/madman/Rpacks/chimera/DESCRIPTION
Modified  /trunk/madman/Rpacks/chipenrich/DESCRIPTION
Modified  /trunk/madman/Rpacks/chipseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/chopsticks/DESCRIPTION
Modified  /trunk/madman/Rpacks/chroGPS/DESCRIPTION
Modified  /trunk/madman/Rpacks/chromDraw/DESCRIPTION
Modified  /trunk/madman/Rpacks/cisPath/DESCRIPTION
Modified  /trunk/madman/Rpacks/cleanUpdTSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/cleaver/DESCRIPTION
Modified  /trunk/madman/Rpacks/clippda/DESCRIPTION
Modified  /trunk/madman/Rpacks/clipper/DESCRIPTION
Modified  /trunk/madman/Rpacks/clonotypeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/clst/DESCRIPTION
Modified  /trunk/madman/Rpacks/clstutils/DESCRIPTION
Modified  /trunk/madman/Rpacks/clusterProfiler/DESCRIPTION
Modified  /trunk/madman/Rpacks/clusterStab/DESCRIPTION
Modified  /trunk/madman/Rpacks/cn.farms/DESCRIPTION
Modified  /trunk/madman/Rpacks/cn.mops/DESCRIPTION
Modified  /trunk/madman/Rpacks/cnvGSA/DESCRIPTION
Modified  /trunk/madman/Rpacks/coGPS/DESCRIPTION
Modified  /trunk/madman/Rpacks/coMET/DESCRIPTION
Modified  /trunk/madman/Rpacks/coRNAi/DESCRIPTION
Modified  /trunk/madman/Rpacks/cobindR/DESCRIPTION
Modified  /trunk/madman/Rpacks/codelink/DESCRIPTION
Modified  /trunk/madman/Rpacks/cogena/DESCRIPTION
Modified  /trunk/madman/Rpacks/compEpiTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/compcodeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/conumee/DESCRIPTION
Modified  /trunk/madman/Rpacks/convert/DESCRIPTION
Modified  /trunk/madman/Rpacks/copa/DESCRIPTION
Modified  /trunk/madman/Rpacks/copynumber/DESCRIPTION
Modified  /trunk/madman/Rpacks/cosmiq/DESCRIPTION
Modified  /trunk/madman/Rpacks/cpvSNP/DESCRIPTION
Modified  /trunk/madman/Rpacks/cqn/DESCRIPTION
Modified  /trunk/madman/Rpacks/crlmm/DESCRIPTION
Modified  /trunk/madman/Rpacks/csaw/DESCRIPTION
Modified  /trunk/madman/Rpacks/ctc/DESCRIPTION
Modified  /trunk/madman/Rpacks/cummeRbund/DESCRIPTION
Modified  /trunk/madman/Rpacks/customProDB/DESCRIPTION
Modified  /trunk/madman/Rpacks/cycle/DESCRIPTION
Modified  /trunk/madman/Rpacks/cytofkit/DESCRIPTION
Modified  /trunk/madman/Rpacks/daMA/DESCRIPTION
Modified  /trunk/madman/Rpacks/dagLogo/DESCRIPTION
Modified  /trunk/madman/Rpacks/ddCt/DESCRIPTION
Modified  /trunk/madman/Rpacks/ddgraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/deepSNV/DESCRIPTION
Modified  /trunk/madman/Rpacks/deltaGseg/DESCRIPTION
Modified  /trunk/madman/Rpacks/derfinder/DESCRIPTION
Modified  /trunk/madman/Rpacks/derfinderHelper/DESCRIPTION
Modified  /trunk/madman/Rpacks/derfinderPlot/DESCRIPTION
Modified  /trunk/madman/Rpacks/dexus/DESCRIPTION
Modified  /trunk/madman/Rpacks/diffGeneAnalysis/DESCRIPTION
Modified  /trunk/madman/Rpacks/diffHic/DESCRIPTION
Modified  /trunk/madman/Rpacks/diggit/DESCRIPTION
Modified  /trunk/madman/Rpacks/dks/DESCRIPTION
Modified  /trunk/madman/Rpacks/domainsignatures/DESCRIPTION
Modified  /trunk/madman/Rpacks/dualKS/DESCRIPTION
Modified  /trunk/madman/Rpacks/dyebias/DESCRIPTION
Modified  /trunk/madman/Rpacks/easyRNASeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/ecolitk/DESCRIPTION
Modified  /trunk/madman/Rpacks/edge/DESCRIPTION
Modified  /trunk/madman/Rpacks/edgeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/eiR/DESCRIPTION
Modified  /trunk/madman/Rpacks/eisa/DESCRIPTION
Modified  /trunk/madman/Rpacks/ensemblVEP/DESCRIPTION
Modified  /trunk/madman/Rpacks/ensembldb/DESCRIPTION
Modified  /trunk/madman/Rpacks/epigenomix/DESCRIPTION
Modified  /trunk/madman/Rpacks/epivizr/DESCRIPTION
Modified  /trunk/madman/Rpacks/erccdashboard/DESCRIPTION
Modified  /trunk/madman/Rpacks/exomeCopy/DESCRIPTION
Modified  /trunk/madman/Rpacks/exomePeak/DESCRIPTION
Modified  /trunk/madman/Rpacks/explorase/DESCRIPTION
Modified  /trunk/madman/Rpacks/fabia/DESCRIPTION
Modified  /trunk/madman/Rpacks/facopy/DESCRIPTION
Modified  /trunk/madman/Rpacks/factDesign/DESCRIPTION
Modified  /trunk/madman/Rpacks/farms/DESCRIPTION
Modified  /trunk/madman/Rpacks/fastLiquidAssociation/DESCRIPTION
Modified  /trunk/madman/Rpacks/fastseg/DESCRIPTION
Modified  /trunk/madman/Rpacks/fdrame/DESCRIPTION
Modified  /trunk/madman/Rpacks/ffpe/DESCRIPTION
Modified  /trunk/madman/Rpacks/flagme/DESCRIPTION
Modified  /trunk/madman/Rpacks/flipflop/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowBeads/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowBin/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowCHIC/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowCL/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowClean/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowClust/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowCore/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowCyBar/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowDensity/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowFP/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowFit/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowMap/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowMatch/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowMeans/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowMerge/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowPeaks/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowPlots/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowQ/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowQB/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowStats/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowTrans/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowType/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowUtils/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowVS/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowViz/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowWorkspace/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowcatchR/DESCRIPTION
Modified  /trunk/madman/Rpacks/fmcsR/DESCRIPTION
Modified  /trunk/madman/Rpacks/focalCall/DESCRIPTION
Modified  /trunk/madman/Rpacks/frma/DESCRIPTION
Modified  /trunk/madman/Rpacks/frmaTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/gCMAP/DESCRIPTION
Modified  /trunk/madman/Rpacks/gCMAPWeb/DESCRIPTION
Modified  /trunk/madman/Rpacks/gQTLBase/DESCRIPTION
Modified  /trunk/madman/Rpacks/gQTLstats/DESCRIPTION
Modified  /trunk/madman/Rpacks/gaga/DESCRIPTION
Modified  /trunk/madman/Rpacks/gage/DESCRIPTION
Modified  /trunk/madman/Rpacks/gaggle/DESCRIPTION
Modified  /trunk/madman/Rpacks/gaia/DESCRIPTION
Modified  /trunk/madman/Rpacks/gaucho/DESCRIPTION
Modified  /trunk/madman/Rpacks/gcrma/DESCRIPTION
Modified  /trunk/madman/Rpacks/gdsfmt/DESCRIPTION
Modified  /trunk/madman/Rpacks/geNetClassifier/DESCRIPTION
Modified  /trunk/madman/Rpacks/geecc/DESCRIPTION
Modified  /trunk/madman/Rpacks/genArise/DESCRIPTION
Modified  /trunk/madman/Rpacks/geneRecommender/DESCRIPTION
Modified  /trunk/madman/Rpacks/geneRxCluster/DESCRIPTION
Modified  /trunk/madman/Rpacks/genefilter/DESCRIPTION
Modified  /trunk/madman/Rpacks/genefu/DESCRIPTION
Modified  /trunk/madman/Rpacks/geneplotter/DESCRIPTION
Modified  /trunk/madman/Rpacks/genoCN/DESCRIPTION
Modified  /trunk/madman/Rpacks/genomation/DESCRIPTION
Modified  /trunk/madman/Rpacks/genomeIntervals/DESCRIPTION
Modified  /trunk/madman/Rpacks/genomes/DESCRIPTION
Modified  /trunk/madman/Rpacks/genoset/DESCRIPTION
Modified  /trunk/madman/Rpacks/gespeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ggbio/DESCRIPTION
Modified  /trunk/madman/Rpacks/ggtree/DESCRIPTION
Modified  /trunk/madman/Rpacks/girafe/DESCRIPTION
Modified  /trunk/madman/Rpacks/globaltest/DESCRIPTION
Modified  /trunk/madman/Rpacks/gmapR/DESCRIPTION
Modified  /trunk/madman/Rpacks/goProfiles/DESCRIPTION
Modified  /trunk/madman/Rpacks/goTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/goseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/gpls/DESCRIPTION
Modified  /trunk/madman/Rpacks/gprege/DESCRIPTION
Modified  /trunk/madman/Rpacks/graph/DESCRIPTION
Modified  /trunk/madman/Rpacks/graphite/DESCRIPTION
Modified  /trunk/madman/Rpacks/groHMM/DESCRIPTION
Modified  /trunk/madman/Rpacks/gtrellis/DESCRIPTION
Modified  /trunk/madman/Rpacks/gwascat/DESCRIPTION
Modified  /trunk/madman/Rpacks/h5vc/DESCRIPTION
Modified  /trunk/madman/Rpacks/hapFabia/DESCRIPTION
Modified  /trunk/madman/Rpacks/hiAnnotator/DESCRIPTION
Modified  /trunk/madman/Rpacks/hiReadsProcessor/DESCRIPTION
Modified  /trunk/madman/Rpacks/hopach/DESCRIPTION
Modified  /trunk/madman/Rpacks/hpar/DESCRIPTION
Modified  /trunk/madman/Rpacks/htSeqTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/hyperdraw/DESCRIPTION
Modified  /trunk/madman/Rpacks/hypergraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/iASeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/iBBiG/DESCRIPTION
Modified  /trunk/madman/Rpacks/iBMQ/DESCRIPTION
Modified  /trunk/madman/Rpacks/iChip/DESCRIPTION
Modified  /trunk/madman/Rpacks/iClusterPlus/DESCRIPTION
Modified  /trunk/madman/Rpacks/iPAC/DESCRIPTION
Modified  /trunk/madman/Rpacks/iSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/ibh/DESCRIPTION
Modified  /trunk/madman/Rpacks/idiogram/DESCRIPTION
Modified  /trunk/madman/Rpacks/illuminaio/DESCRIPTION
Modified  /trunk/madman/Rpacks/imageHTS/DESCRIPTION
Modified  /trunk/madman/Rpacks/immunoClust/DESCRIPTION
Modified  /trunk/madman/Rpacks/impute/DESCRIPTION
Modified  /trunk/madman/Rpacks/inSilicoDb/DESCRIPTION
Modified  /trunk/madman/Rpacks/inSilicoMerging/DESCRIPTION
Modified  /trunk/madman/Rpacks/intansv/DESCRIPTION
Modified  /trunk/madman/Rpacks/interactiveDisplay/DESCRIPTION
Modified  /trunk/madman/Rpacks/interactiveDisplayBase/DESCRIPTION
Modified  /trunk/madman/Rpacks/inveRsion/DESCRIPTION
Modified  /trunk/madman/Rpacks/iontree/DESCRIPTION
Modified  /trunk/madman/Rpacks/isobar/DESCRIPTION
Modified  /trunk/madman/Rpacks/iterativeBMA/DESCRIPTION
Modified  /trunk/madman/Rpacks/iterativeBMAsurv/DESCRIPTION
Modified  /trunk/madman/Rpacks/jmosaics/DESCRIPTION
Modified  /trunk/madman/Rpacks/joda/DESCRIPTION
Modified  /trunk/madman/Rpacks/kebabs/DESCRIPTION
Modified  /trunk/madman/Rpacks/keggorthology/DESCRIPTION
Modified  /trunk/madman/Rpacks/lapmix/DESCRIPTION
Modified  /trunk/madman/Rpacks/les/DESCRIPTION
Modified  /trunk/madman/Rpacks/limma/DESCRIPTION
Modified  /trunk/madman/Rpacks/limmaGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/lmdme/DESCRIPTION
Modified  /trunk/madman/Rpacks/logicFS/DESCRIPTION
Modified  /trunk/madman/Rpacks/logitT/DESCRIPTION
Modified  /trunk/madman/Rpacks/lol/DESCRIPTION
Modified  /trunk/madman/Rpacks/lpNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/lumi/DESCRIPTION
Modified  /trunk/madman/Rpacks/mAPKL/DESCRIPTION
Modified  /trunk/madman/Rpacks/mBPCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/mQTL.NMR/DESCRIPTION
Modified  /trunk/madman/Rpacks/maCorrPlot/DESCRIPTION
Modified  /trunk/madman/Rpacks/maPredictDSC/DESCRIPTION
Modified  /trunk/madman/Rpacks/maSigPro/DESCRIPTION
Modified  /trunk/madman/Rpacks/maanova/DESCRIPTION
Modified  /trunk/madman/Rpacks/macat/DESCRIPTION
Modified  /trunk/madman/Rpacks/made4/DESCRIPTION
Modified  /trunk/madman/Rpacks/maigesPack/DESCRIPTION
Modified  /trunk/madman/Rpacks/makecdfenv/DESCRIPTION
Modified  /trunk/madman/Rpacks/manta/DESCRIPTION
Modified  /trunk/madman/Rpacks/marray/DESCRIPTION
Modified  /trunk/madman/Rpacks/maskBAD/DESCRIPTION
Modified  /trunk/madman/Rpacks/massiR/DESCRIPTION
Modified  /trunk/madman/Rpacks/matchBox/DESCRIPTION
Modified  /trunk/madman/Rpacks/mcaGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/mdgsa/DESCRIPTION
Modified  /trunk/madman/Rpacks/mdqc/DESCRIPTION
Modified  /trunk/madman/Rpacks/meshr/DESCRIPTION
Modified  /trunk/madman/Rpacks/messina/DESCRIPTION
Modified  /trunk/madman/Rpacks/metaArray/DESCRIPTION
Modified  /trunk/madman/Rpacks/metaMS/DESCRIPTION
Modified  /trunk/madman/Rpacks/metaSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/metabomxtr/DESCRIPTION
Modified  /trunk/madman/Rpacks/metagene/DESCRIPTION
Modified  /trunk/madman/Rpacks/metagenomeSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/metahdep/DESCRIPTION
Modified  /trunk/madman/Rpacks/metaseqR/DESCRIPTION
Modified  /trunk/madman/Rpacks/methVisual/DESCRIPTION
Modified  /trunk/madman/Rpacks/methyAnalysis/DESCRIPTION
Modified  /trunk/madman/Rpacks/methylMnM/DESCRIPTION
Modified  /trunk/madman/Rpacks/methylPipe/DESCRIPTION
Modified  /trunk/madman/Rpacks/methylumi/DESCRIPTION
Modified  /trunk/madman/Rpacks/mgsa/DESCRIPTION
Modified  /trunk/madman/Rpacks/miRNApath/DESCRIPTION
Modified  /trunk/madman/Rpacks/miRNAtap/DESCRIPTION
Modified  /trunk/madman/Rpacks/microRNA/DESCRIPTION
Modified  /trunk/madman/Rpacks/minet/DESCRIPTION
Modified  /trunk/madman/Rpacks/minfi/DESCRIPTION
Modified  /trunk/madman/Rpacks/missMethyl/DESCRIPTION
Modified  /trunk/madman/Rpacks/mitoODE/DESCRIPTION
Modified  /trunk/madman/Rpacks/mmnet/DESCRIPTION
Modified  /trunk/madman/Rpacks/mogsa/DESCRIPTION
Modified  /trunk/madman/Rpacks/monocle/DESCRIPTION
Modified  /trunk/madman/Rpacks/mosaics/DESCRIPTION
Modified  /trunk/madman/Rpacks/motifRG/DESCRIPTION
Modified  /trunk/madman/Rpacks/motifStack/DESCRIPTION
Modified  /trunk/madman/Rpacks/msa/DESCRIPTION
Modified  /trunk/madman/Rpacks/msmsEDA/DESCRIPTION
Modified  /trunk/madman/Rpacks/msmsTests/DESCRIPTION
Modified  /trunk/madman/Rpacks/multiscan/DESCRIPTION
Modified  /trunk/madman/Rpacks/multtest/DESCRIPTION
Modified  /trunk/madman/Rpacks/muscle/DESCRIPTION
Modified  /trunk/madman/Rpacks/mvGST/DESCRIPTION
Modified  /trunk/madman/Rpacks/mygene/DESCRIPTION
Modified  /trunk/madman/Rpacks/mzID/DESCRIPTION
Modified  /trunk/madman/Rpacks/mzR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ncdfFlow/DESCRIPTION
Modified  /trunk/madman/Rpacks/neaGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/nem/DESCRIPTION
Modified  /trunk/madman/Rpacks/netbenchmark/DESCRIPTION
Modified  /trunk/madman/Rpacks/netbiov/DESCRIPTION
Modified  /trunk/madman/Rpacks/nethet/DESCRIPTION
Modified  /trunk/madman/Rpacks/netresponse/DESCRIPTION
Modified  /trunk/madman/Rpacks/networkBMA/DESCRIPTION
Modified  /trunk/madman/Rpacks/nnNorm/DESCRIPTION
Modified  /trunk/madman/Rpacks/nondetects/DESCRIPTION
Modified  /trunk/madman/Rpacks/npGSEA/DESCRIPTION
Modified  /trunk/madman/Rpacks/nucleR/DESCRIPTION
Modified  /trunk/madman/Rpacks/nudge/DESCRIPTION
Modified  /trunk/madman/Rpacks/occugene/DESCRIPTION
Modified  /trunk/madman/Rpacks/oligo/DESCRIPTION
Modified  /trunk/madman/Rpacks/oligoClasses/DESCRIPTION
Modified  /trunk/madman/Rpacks/omicade4/DESCRIPTION
Modified  /trunk/madman/Rpacks/oneChannelGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/ontoCAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/openCyto/DESCRIPTION
Modified  /trunk/madman/Rpacks/oposSOM/DESCRIPTION
Modified  /trunk/madman/Rpacks/pRoloc/DESCRIPTION
Modified  /trunk/madman/Rpacks/pRolocGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/paircompviz/DESCRIPTION
Modified  /trunk/madman/Rpacks/pandaR/DESCRIPTION
Modified  /trunk/madman/Rpacks/panp/DESCRIPTION
Modified  /trunk/madman/Rpacks/parglms/DESCRIPTION
Modified  /trunk/madman/Rpacks/parody/DESCRIPTION
Modified  /trunk/madman/Rpacks/pathRender/DESCRIPTION
Modified  /trunk/madman/Rpacks/pathifier/DESCRIPTION
Modified  /trunk/madman/Rpacks/pathview/DESCRIPTION
Modified  /trunk/madman/Rpacks/paxtoolsr/DESCRIPTION
Modified  /trunk/madman/Rpacks/pcaGoPromoter/DESCRIPTION
Modified  /trunk/madman/Rpacks/pcaMethods/DESCRIPTION
Modified  /trunk/madman/Rpacks/pcot2/DESCRIPTION
Modified  /trunk/madman/Rpacks/pdInfoBuilder/DESCRIPTION
Modified  /trunk/madman/Rpacks/pdmclass/DESCRIPTION
Modified  /trunk/madman/Rpacks/pepStat/DESCRIPTION
Modified  /trunk/madman/Rpacks/pepXMLTab/DESCRIPTION
Modified  /trunk/madman/Rpacks/phenoDist/DESCRIPTION
Modified  /trunk/madman/Rpacks/phenoTest/DESCRIPTION
Modified  /trunk/madman/Rpacks/phyloseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/piano/DESCRIPTION
Modified  /trunk/madman/Rpacks/pickgene/DESCRIPTION
Modified  /trunk/madman/Rpacks/pint/DESCRIPTION
Modified  /trunk/madman/Rpacks/pkgDepTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/plateCore/DESCRIPTION
Modified  /trunk/madman/Rpacks/plethy/DESCRIPTION
Modified  /trunk/madman/Rpacks/plgem/DESCRIPTION
Modified  /trunk/madman/Rpacks/plier/DESCRIPTION
Modified  /trunk/madman/Rpacks/plrs/DESCRIPTION
Modified  /trunk/madman/Rpacks/plw/DESCRIPTION
Modified  /trunk/madman/Rpacks/pmm/DESCRIPTION
Modified  /trunk/madman/Rpacks/podkat/DESCRIPTION
Modified  /trunk/madman/Rpacks/polyester/DESCRIPTION
Modified  /trunk/madman/Rpacks/ppiStats/DESCRIPTION
Modified  /trunk/madman/Rpacks/prada/DESCRIPTION
Modified  /trunk/madman/Rpacks/prebs/DESCRIPTION
Modified  /trunk/madman/Rpacks/predictionet/DESCRIPTION
Modified  /trunk/madman/Rpacks/preprocessCore/DESCRIPTION
Modified  /trunk/madman/Rpacks/proBAMr/DESCRIPTION
Modified  /trunk/madman/Rpacks/procoil/DESCRIPTION
Modified  /trunk/madman/Rpacks/prot2D/DESCRIPTION
Modified  /trunk/madman/Rpacks/proteinProfiles/DESCRIPTION
Modified  /trunk/madman/Rpacks/proteoQC/DESCRIPTION
Modified  /trunk/madman/Rpacks/puma/DESCRIPTION
Modified  /trunk/madman/Rpacks/pvac/DESCRIPTION
Modified  /trunk/madman/Rpacks/pvca/DESCRIPTION
Modified  /trunk/madman/Rpacks/pwOmics/DESCRIPTION
Modified  /trunk/madman/Rpacks/qcmetrics/DESCRIPTION
Modified  /trunk/madman/Rpacks/qpcrNorm/DESCRIPTION
Modified  /trunk/madman/Rpacks/qpgraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/qrqc/DESCRIPTION
Modified  /trunk/madman/Rpacks/quantro/DESCRIPTION
Modified  /trunk/madman/Rpacks/quantsmooth/DESCRIPTION
Modified  /trunk/madman/Rpacks/qusage/DESCRIPTION
Modified  /trunk/madman/Rpacks/qvalue/DESCRIPTION
Modified  /trunk/madman/Rpacks/r3Cseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/rBiopaxParser/DESCRIPTION
Modified  /trunk/madman/Rpacks/rGADEM/DESCRIPTION
Modified  /trunk/madman/Rpacks/rGREAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/rHVDM/DESCRIPTION
Modified  /trunk/madman/Rpacks/rMAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/rRDP/DESCRIPTION
Modified  /trunk/madman/Rpacks/rSFFreader/DESCRIPTION
Modified  /trunk/madman/Rpacks/rTANDEM/DESCRIPTION
Modified  /trunk/madman/Rpacks/rTRM/DESCRIPTION
Modified  /trunk/madman/Rpacks/rTRMui/DESCRIPTION
Modified  /trunk/madman/Rpacks/rain/DESCRIPTION
Modified  /trunk/madman/Rpacks/rama/DESCRIPTION
Modified  /trunk/madman/Rpacks/randPack/DESCRIPTION
Modified  /trunk/madman/Rpacks/rbsurv/DESCRIPTION
Modified  /trunk/madman/Rpacks/rcellminer/DESCRIPTION
Modified  /trunk/madman/Rpacks/reb/DESCRIPTION
Modified  /trunk/madman/Rpacks/regionReport/DESCRIPTION
Modified  /trunk/madman/Rpacks/regioneR/DESCRIPTION
Modified  /trunk/madman/Rpacks/rfPred/DESCRIPTION
Modified  /trunk/madman/Rpacks/rgsepd/DESCRIPTION
Modified  /trunk/madman/Rpacks/rhdf5/DESCRIPTION
Modified  /trunk/madman/Rpacks/riboSeqR/DESCRIPTION
Modified  /trunk/madman/Rpacks/rnaSeqMap/DESCRIPTION
Modified  /trunk/madman/Rpacks/roar/DESCRIPTION
Modified  /trunk/madman/Rpacks/rols/DESCRIPTION
Modified  /trunk/madman/Rpacks/rpx/DESCRIPTION
Modified  /trunk/madman/Rpacks/rqubic/DESCRIPTION
Modified  /trunk/madman/Rpacks/rsbml/DESCRIPTION
Modified  /trunk/madman/Rpacks/rtracklayer/DESCRIPTION
Modified  /trunk/madman/Rpacks/sRAP/DESCRIPTION
Modified  /trunk/madman/Rpacks/sSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/safe/DESCRIPTION
Modified  /trunk/madman/Rpacks/sagenhaft/DESCRIPTION
Modified  /trunk/madman/Rpacks/sangerseqR/DESCRIPTION
Modified  /trunk/madman/Rpacks/sapFinder/DESCRIPTION
Modified  /trunk/madman/Rpacks/saps/DESCRIPTION
Modified  /trunk/madman/Rpacks/savR/DESCRIPTION
Modified  /trunk/madman/Rpacks/scsR/DESCRIPTION
Modified  /trunk/madman/Rpacks/segmentSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/seq2pathway/DESCRIPTION
Modified  /trunk/madman/Rpacks/seqCNA/DESCRIPTION
Modified  /trunk/madman/Rpacks/seqLogo/DESCRIPTION
Modified  /trunk/madman/Rpacks/seqPattern/DESCRIPTION
Modified  /trunk/madman/Rpacks/seqTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/seqbias/DESCRIPTION
Modified  /trunk/madman/Rpacks/seqplots/DESCRIPTION
Modified  /trunk/madman/Rpacks/shinyMethyl/DESCRIPTION
Modified  /trunk/madman/Rpacks/shinyTANDEM/DESCRIPTION
Modified  /trunk/madman/Rpacks/sigPathway/DESCRIPTION
Modified  /trunk/madman/Rpacks/sigaR/DESCRIPTION
Modified  /trunk/madman/Rpacks/siggenes/DESCRIPTION
Modified  /trunk/madman/Rpacks/sigsquared/DESCRIPTION
Modified  /trunk/madman/Rpacks/similaRpeak/DESCRIPTION
Modified  /trunk/madman/Rpacks/simpleaffy/DESCRIPTION
Modified  /trunk/madman/Rpacks/simulatorZ/DESCRIPTION
Modified  /trunk/madman/Rpacks/sincell/DESCRIPTION
Modified  /trunk/madman/Rpacks/sizepower/DESCRIPTION
Modified  /trunk/madman/Rpacks/skewr/DESCRIPTION
Modified  /trunk/madman/Rpacks/snapCGH/DESCRIPTION
Modified  /trunk/madman/Rpacks/snm/DESCRIPTION
Modified  /trunk/madman/Rpacks/snpStats/DESCRIPTION
Modified  /trunk/madman/Rpacks/soGGi/DESCRIPTION
Modified  /trunk/madman/Rpacks/spade/DESCRIPTION
Modified  /trunk/madman/Rpacks/specL/DESCRIPTION
Modified  /trunk/madman/Rpacks/spikeLI/DESCRIPTION
Modified  /trunk/madman/Rpacks/spkTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/spliceR/DESCRIPTION
Modified  /trunk/madman/Rpacks/spliceSites/DESCRIPTION
Modified  /trunk/madman/Rpacks/splicegear/DESCRIPTION
Modified  /trunk/madman/Rpacks/splots/DESCRIPTION
Modified  /trunk/madman/Rpacks/spotSegmentation/DESCRIPTION
Modified  /trunk/madman/Rpacks/sscore/DESCRIPTION
Modified  /trunk/madman/Rpacks/ssize/DESCRIPTION
Modified  /trunk/madman/Rpacks/ssviz/DESCRIPTION
Modified  /trunk/madman/Rpacks/staRank/DESCRIPTION
Modified  /trunk/madman/Rpacks/stepNorm/DESCRIPTION
Modified  /trunk/madman/Rpacks/stepwiseCM/DESCRIPTION
Modified  /trunk/madman/Rpacks/supraHex/DESCRIPTION
Modified  /trunk/madman/Rpacks/survcomp/DESCRIPTION
Modified  /trunk/madman/Rpacks/sva/DESCRIPTION
Modified  /trunk/madman/Rpacks/switchBox/DESCRIPTION
Modified  /trunk/madman/Rpacks/synapter/DESCRIPTION
Modified  /trunk/madman/Rpacks/systemPipeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/tRanslatome/DESCRIPTION
Modified  /trunk/madman/Rpacks/ternarynet/DESCRIPTION
Modified  /trunk/madman/Rpacks/tigre/DESCRIPTION
Modified  /trunk/madman/Rpacks/tilingArray/DESCRIPTION
Modified  /trunk/madman/Rpacks/timecourse/DESCRIPTION
Modified  /trunk/madman/Rpacks/tkWidgets/DESCRIPTION
Modified  /trunk/madman/Rpacks/topGO/DESCRIPTION
Modified  /trunk/madman/Rpacks/trackViewer/DESCRIPTION
Modified  /trunk/madman/Rpacks/tracktables/DESCRIPTION
Modified  /trunk/madman/Rpacks/triform/DESCRIPTION
Modified  /trunk/madman/Rpacks/trigger/DESCRIPTION
Modified  /trunk/madman/Rpacks/trio/DESCRIPTION
Modified  /trunk/madman/Rpacks/triplex/DESCRIPTION
Modified  /trunk/madman/Rpacks/tspair/DESCRIPTION
Modified  /trunk/madman/Rpacks/tweeDEseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/twilight/DESCRIPTION
Modified  /trunk/madman/Rpacks/unifiedWMWqPCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/vbmp/DESCRIPTION
Modified  /trunk/madman/Rpacks/viper/DESCRIPTION
Modified  /trunk/madman/Rpacks/vsn/DESCRIPTION
Modified  /trunk/madman/Rpacks/vtpnet/DESCRIPTION
Modified  /trunk/madman/Rpacks/wateRmelon/DESCRIPTION
Modified  /trunk/madman/Rpacks/wavClusteR/DESCRIPTION
Modified  /trunk/madman/Rpacks/waveTiling/DESCRIPTION
Modified  /trunk/madman/Rpacks/weaver/DESCRIPTION
Modified  /trunk/madman/Rpacks/webbioc/DESCRIPTION
Modified  /trunk/madman/Rpacks/widgetTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/xcms/DESCRIPTION
Modified  /trunk/madman/Rpacks/xmapbridge/DESCRIPTION
Modified  /trunk/madman/Rpacks/xps/DESCRIPTION
Modified  /trunk/madman/Rpacks/yaqcaffy/DESCRIPTION
Modified  /trunk/madman/Rpacks/zlibbioc/DESCRIPTION
Bump versions in trunk after creation of 3.1 branch.
Revision: 102592
Author: hpages
Date: 2015-04-16T19:51:48+00:00
Paths:
Modified  /trunk/madman/Rpacks/IRanges/man/NCList-class.Rd
add reference to Nested Containment List paper
Revision: 102591
Author: d.tenenbaum
Date: 2015-04-16T19:42:02+00:00
Paths:
Modified  /trunk/madman/Rpacks/ABSSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/ABarray/DESCRIPTION
Modified  /trunk/madman/Rpacks/ACME/DESCRIPTION
Modified  /trunk/madman/Rpacks/ADaCGH2/DESCRIPTION
Modified  /trunk/madman/Rpacks/AGDEX/DESCRIPTION
Modified  /trunk/madman/Rpacks/AIMS/DESCRIPTION
Modified  /trunk/madman/Rpacks/ALDEx2/DESCRIPTION
Modified  /trunk/madman/Rpacks/ARRmNormalization/DESCRIPTION
Modified  /trunk/madman/Rpacks/ASEB/DESCRIPTION
Modified  /trunk/madman/Rpacks/ASGSCA/DESCRIPTION
Modified  /trunk/madman/Rpacks/ASSET/DESCRIPTION
Modified  /trunk/madman/Rpacks/ASSIGN/DESCRIPTION
Modified  /trunk/madman/Rpacks/AffyCompatible/DESCRIPTION
Modified  /trunk/madman/Rpacks/AffyExpress/DESCRIPTION
Modified  /trunk/madman/Rpacks/AffyRNADegradation/DESCRIPTION
Modified  /trunk/madman/Rpacks/AffyTiling/DESCRIPTION
Modified  /trunk/madman/Rpacks/AgiMicroRna/DESCRIPTION
Modified  /trunk/madman/Rpacks/AllelicImbalance/DESCRIPTION
Modified  /trunk/madman/Rpacks/AnalysisPageServer/DESCRIPTION
Modified  /trunk/madman/Rpacks/AnnotationDbi/DESCRIPTION
Modified  /trunk/madman/Rpacks/AnnotationForge/DESCRIPTION
Modified  /trunk/madman/Rpacks/AnnotationFuncs/DESCRIPTION
Modified  /trunk/madman/Rpacks/AnnotationHub/DESCRIPTION
Modified  /trunk/madman/Rpacks/ArrayExpress/DESCRIPTION
Modified  /trunk/madman/Rpacks/ArrayExpressHTS/DESCRIPTION
Modified  /trunk/madman/Rpacks/ArrayTV/DESCRIPTION
Modified  /trunk/madman/Rpacks/ArrayTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/AtlasRDF/DESCRIPTION
Modified  /trunk/madman/Rpacks/BAC/DESCRIPTION
Modified  /trunk/madman/Rpacks/BADER/DESCRIPTION
Modified  /trunk/madman/Rpacks/BAGS/DESCRIPTION
Modified  /trunk/madman/Rpacks/BCRANK/DESCRIPTION
Modified  /trunk/madman/Rpacks/BEAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/BEclear/DESCRIPTION
Modified  /trunk/madman/Rpacks/BGmix/DESCRIPTION
Modified  /trunk/madman/Rpacks/BHC/DESCRIPTION
Modified  /trunk/madman/Rpacks/BRAIN/DESCRIPTION
Modified  /trunk/madman/Rpacks/BSgenome/DESCRIPTION
Modified  /trunk/madman/Rpacks/BUS/DESCRIPTION
Modified  /trunk/madman/Rpacks/BaseSpaceR/DESCRIPTION
Modified  /trunk/madman/Rpacks/Basic4Cseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/BayesPeak/DESCRIPTION
Modified  /trunk/madman/Rpacks/BeadDataPackR/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiGGR/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiRewire/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/BicARE/DESCRIPTION
Modified  /trunk/madman/Rpacks/BioMVCClass/DESCRIPTION
Modified  /trunk/madman/Rpacks/BioNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/BioSeqClass/DESCRIPTION
Modified  /trunk/madman/Rpacks/Biobase/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiocCaseStudies/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiocCheck/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiocGenerics/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiocInstaller/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiocParallel/DESCRIPTION
Modified  /trunk/madman/Rpacks/BiocStyle/DESCRIPTION
Modified  /trunk/madman/Rpacks/Biostrings/DESCRIPTION
Modified  /trunk/madman/Rpacks/BitSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/BrainStars/DESCRIPTION
Modified  /trunk/madman/Rpacks/BridgeDbR/DESCRIPTION
Modified  /trunk/madman/Rpacks/BrowserViz/DESCRIPTION
Modified  /trunk/madman/Rpacks/BrowserVizDemo/DESCRIPTION
Modified  /trunk/madman/Rpacks/BubbleTree/DESCRIPTION
Modified  /trunk/madman/Rpacks/BufferedMatrix/DESCRIPTION
Modified  /trunk/madman/Rpacks/BufferedMatrixMethods/DESCRIPTION
Modified  /trunk/madman/Rpacks/CAFE/DESCRIPTION
Modified  /trunk/madman/Rpacks/CAGEr/DESCRIPTION
Modified  /trunk/madman/Rpacks/CALIB/DESCRIPTION
Modified  /trunk/madman/Rpacks/CAMERA/DESCRIPTION
Modified  /trunk/madman/Rpacks/CAnD/DESCRIPTION
Modified  /trunk/madman/Rpacks/CFAssay/DESCRIPTION
Modified  /trunk/madman/Rpacks/CGEN/DESCRIPTION
Modified  /trunk/madman/Rpacks/CGHbase/DESCRIPTION
Modified  /trunk/madman/Rpacks/CGHcall/DESCRIPTION
Modified  /trunk/madman/Rpacks/CGHnormaliter/DESCRIPTION
Modified  /trunk/madman/Rpacks/CGHregions/DESCRIPTION
Modified  /trunk/madman/Rpacks/CMA/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNAnorm/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNEr/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNORdt/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNORfeeder/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNORfuzzy/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNORode/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNVrd2/DESCRIPTION
Modified  /trunk/madman/Rpacks/CNVtools/DESCRIPTION
Modified  /trunk/madman/Rpacks/CODEX/DESCRIPTION
Modified  /trunk/madman/Rpacks/COHCAP/DESCRIPTION
Modified  /trunk/madman/Rpacks/COMPASS/DESCRIPTION
Modified  /trunk/madman/Rpacks/CORREP/DESCRIPTION
Modified  /trunk/madman/Rpacks/COSNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/CRISPRseek/DESCRIPTION
Modified  /trunk/madman/Rpacks/CRImage/DESCRIPTION
Modified  /trunk/madman/Rpacks/CSAR/DESCRIPTION
Modified  /trunk/madman/Rpacks/CSSP/DESCRIPTION
Modified  /trunk/madman/Rpacks/CancerMutationAnalysis/DESCRIPTION
Modified  /trunk/madman/Rpacks/Cardinal/DESCRIPTION
Modified  /trunk/madman/Rpacks/Category/DESCRIPTION
Modified  /trunk/madman/Rpacks/CellNOptR/DESCRIPTION
Modified  /trunk/madman/Rpacks/CexoR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChAMP/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChIPQC/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChIPXpress/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChIPpeakAnno/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChIPseeker/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChIPseqR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChIPsim/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChemmineOB/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChemmineR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ChromHeatMap/DESCRIPTION
Modified  /trunk/madman/Rpacks/ClassifyR/DESCRIPTION
Modified  /trunk/madman/Rpacks/Clomial/DESCRIPTION
Modified  /trunk/madman/Rpacks/Clonality/DESCRIPTION
Modified  /trunk/madman/Rpacks/CoCiteStats/DESCRIPTION
Modified  /trunk/madman/Rpacks/CoGAPS/DESCRIPTION
Modified  /trunk/madman/Rpacks/CoRegNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/CompGO/DESCRIPTION
Modified  /trunk/madman/Rpacks/ComplexHeatmap/DESCRIPTION
Modified  /trunk/madman/Rpacks/ConsensusClusterPlus/DESCRIPTION
Modified  /trunk/madman/Rpacks/CopyNumber450k/DESCRIPTION
Modified  /trunk/madman/Rpacks/CopywriteR/DESCRIPTION
Modified  /trunk/madman/Rpacks/CorMut/DESCRIPTION
Modified  /trunk/madman/Rpacks/Cormotif/DESCRIPTION
Modified  /trunk/madman/Rpacks/CoverageView/DESCRIPTION
Modified  /trunk/madman/Rpacks/DART/DESCRIPTION
Modified  /trunk/madman/Rpacks/DASiR/DESCRIPTION
Modified  /trunk/madman/Rpacks/DAVIDQuery/DESCRIPTION
Modified  /trunk/madman/Rpacks/DBChIP/DESCRIPTION
Modified  /trunk/madman/Rpacks/DECIPHER/DESCRIPTION
Modified  /trunk/madman/Rpacks/DEDS/DESCRIPTION
Modified  /trunk/madman/Rpacks/DEGraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/DEGreport/DESCRIPTION
Modified  /trunk/madman/Rpacks/DEGseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/DESeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/DESeq2/DESCRIPTION
Modified  /trunk/madman/Rpacks/DEXSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/DFP/DESCRIPTION
Modified  /trunk/madman/Rpacks/DMRcaller/DESCRIPTION
Modified  /trunk/madman/Rpacks/DMRcate/DESCRIPTION
Modified  /trunk/madman/Rpacks/DMRforPairs/DESCRIPTION
Modified  /trunk/madman/Rpacks/DNAcopy/DESCRIPTION
Modified  /trunk/madman/Rpacks/DOQTL/DESCRIPTION
Modified  /trunk/madman/Rpacks/DOSE/DESCRIPTION
Modified  /trunk/madman/Rpacks/DSS/DESCRIPTION
Modified  /trunk/madman/Rpacks/DTA/DESCRIPTION
Modified  /trunk/madman/Rpacks/DeconRNASeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/DiffBind/DESCRIPTION
Modified  /trunk/madman/Rpacks/DirichletMultinomial/DESCRIPTION
Modified  /trunk/madman/Rpacks/DriverNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/DrugVsDisease/DESCRIPTION
Modified  /trunk/madman/Rpacks/DupChecker/DESCRIPTION
Modified  /trunk/madman/Rpacks/DynDoc/DESCRIPTION
Modified  /trunk/madman/Rpacks/EBImage/DESCRIPTION
Modified  /trunk/madman/Rpacks/EBSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/EBSeqHMM/DESCRIPTION
Modified  /trunk/madman/Rpacks/EBarrays/DESCRIPTION
Modified  /trunk/madman/Rpacks/EBcoexpress/DESCRIPTION
Modified  /trunk/madman/Rpacks/EDASeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/EDDA/DESCRIPTION
Modified  /trunk/madman/Rpacks/ELBOW/DESCRIPTION
Modified  /trunk/madman/Rpacks/EMDomics/DESCRIPTION
Modified  /trunk/madman/Rpacks/ENCODExplorer/DESCRIPTION
Modified  /trunk/madman/Rpacks/ENVISIONQuery/DESCRIPTION
Modified  /trunk/madman/Rpacks/ENmix/DESCRIPTION
Modified  /trunk/madman/Rpacks/EasyqpcR/DESCRIPTION
Modified  /trunk/madman/Rpacks/EnrichmentBrowser/DESCRIPTION
Modified  /trunk/madman/Rpacks/ExiMiR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ExpressionView/DESCRIPTION
Modified  /trunk/madman/Rpacks/FEM/DESCRIPTION
Modified  /trunk/madman/Rpacks/FGNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/FISHalyseR/DESCRIPTION
Modified  /trunk/madman/Rpacks/FRGEpistasis/DESCRIPTION
Modified  /trunk/madman/Rpacks/FlowRepositoryR/DESCRIPTION
Modified  /trunk/madman/Rpacks/FlowSOM/DESCRIPTION
Modified  /trunk/madman/Rpacks/FourCSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/FunciSNP/DESCRIPTION
Modified  /trunk/madman/Rpacks/GENE.E/DESCRIPTION
Modified  /trunk/madman/Rpacks/GENESIS/DESCRIPTION
Modified  /trunk/madman/Rpacks/GEOmetadb/DESCRIPTION
Modified  /trunk/madman/Rpacks/GEOquery/DESCRIPTION
Modified  /trunk/madman/Rpacks/GEOsubmission/DESCRIPTION
Modified  /trunk/madman/Rpacks/GEWIST/DESCRIPTION
Modified  /trunk/madman/Rpacks/GGBase/DESCRIPTION
Modified  /trunk/madman/Rpacks/GGtools/DESCRIPTION
Modified  /trunk/madman/Rpacks/GLAD/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOFunction/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOSemSim/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOSim/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOTHiC/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOexpress/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOstats/DESCRIPTION
Modified  /trunk/madman/Rpacks/GOsummaries/DESCRIPTION
Modified  /trunk/madman/Rpacks/GRENITS/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSAR/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSCA/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSEABase/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSEAlm/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSRI/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSReg/DESCRIPTION
Modified  /trunk/madman/Rpacks/GSVA/DESCRIPTION
Modified  /trunk/madman/Rpacks/GWASTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneAnswers/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneExpressionSignature/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneGA/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneMeta/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneNetworkBuilder/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneOverlap/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneRegionScan/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneSelectMMD/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneSelector/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneticsDesign/DESCRIPTION
Modified  /trunk/madman/Rpacks/GeneticsPed/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenoView/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomeGraphs/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomeInfoDb/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomicAlignments/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomicFeatures/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomicFiles/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomicInteractions/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomicRanges/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomicTuples/DESCRIPTION
Modified  /trunk/madman/Rpacks/Genominator/DESCRIPTION
Modified  /trunk/madman/Rpacks/GlobalAncova/DESCRIPTION
Modified  /trunk/madman/Rpacks/GoogleGenomics/DESCRIPTION
Modified  /trunk/madman/Rpacks/GraphAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/GraphAlignment/DESCRIPTION
Modified  /trunk/madman/Rpacks/GraphPAC/DESCRIPTION
Modified  /trunk/madman/Rpacks/GreyListChIP/DESCRIPTION
Modified  /trunk/madman/Rpacks/Gviz/DESCRIPTION
Modified  /trunk/madman/Rpacks/HCsnip/DESCRIPTION
Modified  /trunk/madman/Rpacks/HDTD/DESCRIPTION
Modified  /trunk/madman/Rpacks/HELP/DESCRIPTION
Modified  /trunk/madman/Rpacks/HEM/DESCRIPTION
Modified  /trunk/madman/Rpacks/HIBAG/DESCRIPTION
Modified  /trunk/madman/Rpacks/HMMcopy/DESCRIPTION
Modified  /trunk/madman/Rpacks/HTSFilter/DESCRIPTION
Modified  /trunk/madman/Rpacks/HTSanalyzeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/HTSeqGenie/DESCRIPTION
Modified  /trunk/madman/Rpacks/HTqPCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/Harshlight/DESCRIPTION
Modified  /trunk/madman/Rpacks/Heatplus/DESCRIPTION
Modified  /trunk/madman/Rpacks/HiTC/DESCRIPTION
Modified  /trunk/madman/Rpacks/HilbertVis/DESCRIPTION
Modified  /trunk/madman/Rpacks/HilbertVisGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/HybridMTest/DESCRIPTION
Modified  /trunk/madman/Rpacks/IMPCdata/DESCRIPTION
Modified  /trunk/madman/Rpacks/INPower/DESCRIPTION
Modified  /trunk/madman/Rpacks/IPPD/DESCRIPTION
Modified  /trunk/madman/Rpacks/IRanges/DESCRIPTION
Modified  /trunk/madman/Rpacks/ITALICS/DESCRIPTION
Modified  /trunk/madman/Rpacks/IVAS/DESCRIPTION
Modified  /trunk/madman/Rpacks/Icens/DESCRIPTION
Modified  /trunk/madman/Rpacks/IdMappingAnalysis/DESCRIPTION
Modified  /trunk/madman/Rpacks/IdMappingRetrieval/DESCRIPTION
Modified  /trunk/madman/Rpacks/IdeoViz/DESCRIPTION
Modified  /trunk/madman/Rpacks/InPAS/DESCRIPTION
Modified  /trunk/madman/Rpacks/IsoGeneGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/KCsmart/DESCRIPTION
Modified  /trunk/madman/Rpacks/KEGGREST/DESCRIPTION
Modified  /trunk/madman/Rpacks/KEGGgraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/KEGGprofile/DESCRIPTION
Modified  /trunk/madman/Rpacks/LBE/DESCRIPTION
Modified  /trunk/madman/Rpacks/LEA/DESCRIPTION
Modified  /trunk/madman/Rpacks/LMGene/DESCRIPTION
Modified  /trunk/madman/Rpacks/LPE/DESCRIPTION
Modified  /trunk/madman/Rpacks/LPEadj/DESCRIPTION
Modified  /trunk/madman/Rpacks/LVSmiRNA/DESCRIPTION
Modified  /trunk/madman/Rpacks/LiquidAssociation/DESCRIPTION
Modified  /trunk/madman/Rpacks/LowMACA/DESCRIPTION
Modified  /trunk/madman/Rpacks/M3D/DESCRIPTION
Modified  /trunk/madman/Rpacks/MAIT/DESCRIPTION
Modified  /trunk/madman/Rpacks/MANOR/DESCRIPTION
Modified  /trunk/madman/Rpacks/MBASED/DESCRIPTION
Modified  /trunk/madman/Rpacks/MBAmethyl/DESCRIPTION
Modified  /trunk/madman/Rpacks/MBCB/DESCRIPTION
Modified  /trunk/madman/Rpacks/MCRestimate/DESCRIPTION
Modified  /trunk/madman/Rpacks/MEDIPS/DESCRIPTION
Modified  /trunk/madman/Rpacks/MEDME/DESCRIPTION
Modified  /trunk/madman/Rpacks/MEIGOR/DESCRIPTION
Modified  /trunk/madman/Rpacks/MGFM/DESCRIPTION
Modified  /trunk/madman/Rpacks/MIMOSA/DESCRIPTION
Modified  /trunk/madman/Rpacks/MLInterfaces/DESCRIPTION
Modified  /trunk/madman/Rpacks/MLP/DESCRIPTION
Modified  /trunk/madman/Rpacks/MLSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/MMDiff/DESCRIPTION
Modified  /trunk/madman/Rpacks/MPFE/DESCRIPTION
Modified  /trunk/madman/Rpacks/MSGFgui/DESCRIPTION
Modified  /trunk/madman/Rpacks/MSGFplus/DESCRIPTION
Modified  /trunk/madman/Rpacks/MSnID/DESCRIPTION
Modified  /trunk/madman/Rpacks/MSnbase/DESCRIPTION
Modified  /trunk/madman/Rpacks/MSstats/DESCRIPTION
Modified  /trunk/madman/Rpacks/MVCClass/DESCRIPTION
Modified  /trunk/madman/Rpacks/MantelCorr/DESCRIPTION
Modified  /trunk/madman/Rpacks/MassArray/DESCRIPTION
Modified  /trunk/madman/Rpacks/MassSpecWavelet/DESCRIPTION
Modified  /trunk/madman/Rpacks/MatrixRider/DESCRIPTION
Modified  /trunk/madman/Rpacks/MeSHDbi/DESCRIPTION
Modified  /trunk/madman/Rpacks/MeSHSim/DESCRIPTION
Modified  /trunk/madman/Rpacks/MeasurementError.cor/DESCRIPTION
Modified  /trunk/madman/Rpacks/MergeMaid/DESCRIPTION
Modified  /trunk/madman/Rpacks/Metab/DESCRIPTION
Modified  /trunk/madman/Rpacks/MethTargetedNGS/DESCRIPTION
Modified  /trunk/madman/Rpacks/MethylAid/DESCRIPTION
Modified  /trunk/madman/Rpacks/MethylMix/DESCRIPTION
Modified  /trunk/madman/Rpacks/MethylSeekR/DESCRIPTION
Modified  /trunk/madman/Rpacks/Mfuzz/DESCRIPTION
Modified  /trunk/madman/Rpacks/MiChip/DESCRIPTION
Modified  /trunk/madman/Rpacks/MiPP/DESCRIPTION
Modified  /trunk/madman/Rpacks/MiRaGE/DESCRIPTION
Modified  /trunk/madman/Rpacks/MineICA/DESCRIPTION
Modified  /trunk/madman/Rpacks/MinimumDistance/DESCRIPTION
Modified  /trunk/madman/Rpacks/Mirsynergy/DESCRIPTION
Modified  /trunk/madman/Rpacks/MmPalateMiRNA/DESCRIPTION
Modified  /trunk/madman/Rpacks/MoPS/DESCRIPTION
Modified  /trunk/madman/Rpacks/MotIV/DESCRIPTION
Modified  /trunk/madman/Rpacks/MotifDb/DESCRIPTION
Modified  /trunk/madman/Rpacks/Mulcom/DESCRIPTION
Modified  /trunk/madman/Rpacks/MultiMed/DESCRIPTION
Modified  /trunk/madman/Rpacks/NCIgraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/NGScopy/DESCRIPTION
Modified  /trunk/madman/Rpacks/NOISeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/NTW/DESCRIPTION
Modified  /trunk/madman/Rpacks/NanoStringQCPro/DESCRIPTION
Modified  /trunk/madman/Rpacks/NarrowPeaks/DESCRIPTION
Modified  /trunk/madman/Rpacks/NetPathMiner/DESCRIPTION
Modified  /trunk/madman/Rpacks/NetSAM/DESCRIPTION
Modified  /trunk/madman/Rpacks/NormqPCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/NuPoP/DESCRIPTION
Modified  /trunk/madman/Rpacks/OCplus/DESCRIPTION
Modified  /trunk/madman/Rpacks/OLIN/DESCRIPTION
Modified  /trunk/madman/Rpacks/OLINgui/DESCRIPTION
Modified  /trunk/madman/Rpacks/OSAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/OTUbase/DESCRIPTION
Modified  /trunk/madman/Rpacks/OmicCircos/DESCRIPTION
Modified  /trunk/madman/Rpacks/OmicsMarkeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/OncoSimulR/DESCRIPTION
Modified  /trunk/madman/Rpacks/OrderedList/DESCRIPTION
Modified  /trunk/madman/Rpacks/OrganismDbi/DESCRIPTION
Modified  /trunk/madman/Rpacks/OutlierD/DESCRIPTION
Modified  /trunk/madman/Rpacks/PAA/DESCRIPTION
Modified  /trunk/madman/Rpacks/PADOG/DESCRIPTION
Modified  /trunk/madman/Rpacks/PANR/DESCRIPTION
Modified  /trunk/madman/Rpacks/PAPi/DESCRIPTION
Modified  /trunk/madman/Rpacks/PAnnBuilder/DESCRIPTION
Modified  /trunk/madman/Rpacks/PCpheno/DESCRIPTION
Modified  /trunk/madman/Rpacks/PECA/DESCRIPTION
Modified  /trunk/madman/Rpacks/PGSEA/DESCRIPTION
Modified  /trunk/madman/Rpacks/PICS/DESCRIPTION
Modified  /trunk/madman/Rpacks/PING/DESCRIPTION
Modified  /trunk/madman/Rpacks/PLPE/DESCRIPTION
Modified  /trunk/madman/Rpacks/PREDA/DESCRIPTION
Modified  /trunk/madman/Rpacks/PROMISE/DESCRIPTION
Modified  /trunk/madman/Rpacks/PROPER/DESCRIPTION
Modified  /trunk/madman/Rpacks/PROcess/DESCRIPTION
Modified  /trunk/madman/Rpacks/PSEA/DESCRIPTION
Modified  /trunk/madman/Rpacks/PSICQUIC/DESCRIPTION
Modified  /trunk/madman/Rpacks/PWMEnrich/DESCRIPTION
Modified  /trunk/madman/Rpacks/PathNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/Pbase/DESCRIPTION
Modified  /trunk/madman/Rpacks/PhenStat/DESCRIPTION
Modified  /trunk/madman/Rpacks/Polyfit/DESCRIPTION
Modified  /trunk/madman/Rpacks/ProCoNA/DESCRIPTION
Modified  /trunk/madman/Rpacks/ProtGenerics/DESCRIPTION
Modified  /trunk/madman/Rpacks/Pviz/DESCRIPTION
Modified  /trunk/madman/Rpacks/QDNAseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/QUALIFIER/DESCRIPTION
Modified  /trunk/madman/Rpacks/QuartPAC/DESCRIPTION
Modified  /trunk/madman/Rpacks/QuasR/DESCRIPTION
Modified  /trunk/madman/Rpacks/R3CPET/DESCRIPTION
Modified  /trunk/madman/Rpacks/R453Plus1Toolbox/DESCRIPTION
Modified  /trunk/madman/Rpacks/RBGL/DESCRIPTION
Modified  /trunk/madman/Rpacks/RBM/DESCRIPTION
Modified  /trunk/madman/Rpacks/RBioinf/DESCRIPTION
Modified  /trunk/madman/Rpacks/RCASPAR/DESCRIPTION
Modified  /trunk/madman/Rpacks/RCyjs/DESCRIPTION
Modified  /trunk/madman/Rpacks/RCytoscape/DESCRIPTION
Modified  /trunk/madman/Rpacks/RDAVIDWebService/DESCRIPTION
Modified  /trunk/madman/Rpacks/RDRToolbox/DESCRIPTION
Modified  /trunk/madman/Rpacks/REDseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/RGSEA/DESCRIPTION
Modified  /trunk/madman/Rpacks/RGalaxy/DESCRIPTION
Modified  /trunk/madman/Rpacks/RIPSeeker/DESCRIPTION
Modified  /trunk/madman/Rpacks/RLMM/DESCRIPTION
Modified  /trunk/madman/Rpacks/RMassBank/DESCRIPTION
Modified  /trunk/madman/Rpacks/RNASeqPower/DESCRIPTION
Modified  /trunk/madman/Rpacks/RNAinteract/DESCRIPTION
Modified  /trunk/madman/Rpacks/RNAither/DESCRIPTION
Modified  /trunk/madman/Rpacks/RNAprobR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ROC/DESCRIPTION
Modified  /trunk/madman/Rpacks/ROntoTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/RPA/DESCRIPTION
Modified  /trunk/madman/Rpacks/RRHO/DESCRIPTION
Modified  /trunk/madman/Rpacks/RSVSim/DESCRIPTION
Modified  /trunk/madman/Rpacks/RTCA/DESCRIPTION
Modified  /trunk/madman/Rpacks/RTN/DESCRIPTION
Modified  /trunk/madman/Rpacks/RTopper/DESCRIPTION
Modified  /trunk/madman/Rpacks/RUVSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/RUVcorr/DESCRIPTION
Modified  /trunk/madman/Rpacks/RUVnormalize/DESCRIPTION
Modified  /trunk/madman/Rpacks/RWebServices/DESCRIPTION
Modified  /trunk/madman/Rpacks/RamiGO/DESCRIPTION
Modified  /trunk/madman/Rpacks/RankProd/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rariant/DESCRIPTION
Modified  /trunk/madman/Rpacks/RbcBook1/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rbowtie/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rcade/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rchemcpp/DESCRIPTION
Modified  /trunk/madman/Rpacks/RchyOptimyx/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rcpi/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rdisop/DESCRIPTION
Modified  /trunk/madman/Rpacks/ReQON/DESCRIPTION
Modified  /trunk/madman/Rpacks/ReactomePA/DESCRIPTION
Modified  /trunk/madman/Rpacks/ReadqPCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/RedeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/RefNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/RefPlus/DESCRIPTION
Modified  /trunk/madman/Rpacks/Repitools/DESCRIPTION
Modified  /trunk/madman/Rpacks/ReportingTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rgraphviz/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rhtslib/DESCRIPTION
Modified  /trunk/madman/Rpacks/Ringo/DESCRIPTION
Modified  /trunk/madman/Rpacks/Risa/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rmagpie/DESCRIPTION
Modified  /trunk/madman/Rpacks/RmiR/DESCRIPTION
Modified  /trunk/madman/Rpacks/RnBeads/DESCRIPTION
Modified  /trunk/madman/Rpacks/RnaSeqSampleSize/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rnits/DESCRIPTION
Modified  /trunk/madman/Rpacks/Roleswitch/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rolexa/DESCRIPTION
Modified  /trunk/madman/Rpacks/RpsiXML/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rqc/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rsamtools/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rsubread/DESCRIPTION
Modified  /trunk/madman/Rpacks/Rtreemix/DESCRIPTION
Modified  /trunk/madman/Rpacks/S4Vectors/DESCRIPTION
Modified  /trunk/madman/Rpacks/SAGx/DESCRIPTION
Modified  /trunk/madman/Rpacks/SANTA/DESCRIPTION
Modified  /trunk/madman/Rpacks/SBMLR/DESCRIPTION
Modified  /trunk/madman/Rpacks/SCAN.UPC/DESCRIPTION
Modified  /trunk/madman/Rpacks/SELEX/DESCRIPTION
Modified  /trunk/madman/Rpacks/SGSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/SIM/DESCRIPTION
Modified  /trunk/madman/Rpacks/SIMAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/SJava/DESCRIPTION
Modified  /trunk/madman/Rpacks/SLGI/DESCRIPTION
Modified  /trunk/madman/Rpacks/SLqPCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/SMAP/DESCRIPTION
Modified  /trunk/madman/Rpacks/SNAGEE/DESCRIPTION
Modified  /trunk/madman/Rpacks/SNPRelate/DESCRIPTION
Modified  /trunk/madman/Rpacks/SNPchip/DESCRIPTION
Modified  /trunk/madman/Rpacks/SPEM/DESCRIPTION
Modified  /trunk/madman/Rpacks/SPIA/DESCRIPTION
Modified  /trunk/madman/Rpacks/SQUADD/DESCRIPTION
Modified  /trunk/madman/Rpacks/SRAdb/DESCRIPTION
Modified  /trunk/madman/Rpacks/SSPA/DESCRIPTION
Modified  /trunk/madman/Rpacks/STAN/DESCRIPTION
Modified  /trunk/madman/Rpacks/STATegRa/DESCRIPTION
Modified  /trunk/madman/Rpacks/STRINGdb/DESCRIPTION
Modified  /trunk/madman/Rpacks/SVM2CRM/DESCRIPTION
Modified  /trunk/madman/Rpacks/SamSPECTRAL/DESCRIPTION
Modified  /trunk/madman/Rpacks/ScISI/DESCRIPTION
Modified  /trunk/madman/Rpacks/SemDist/DESCRIPTION
Modified  /trunk/madman/Rpacks/SeqArray/DESCRIPTION
Modified  /trunk/madman/Rpacks/SeqGSEA/DESCRIPTION
Modified  /trunk/madman/Rpacks/SeqVarTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/ShortRead/DESCRIPTION
Modified  /trunk/madman/Rpacks/SigCheck/DESCRIPTION
Modified  /trunk/madman/Rpacks/SigFuge/DESCRIPTION
Modified  /trunk/madman/Rpacks/SimBindProfiles/DESCRIPTION
Modified  /trunk/madman/Rpacks/SomatiCA/DESCRIPTION
Modified  /trunk/madman/Rpacks/SomaticSignatures/DESCRIPTION
Modified  /trunk/madman/Rpacks/SpacePAC/DESCRIPTION
Modified  /trunk/madman/Rpacks/SpeCond/DESCRIPTION
Modified  /trunk/madman/Rpacks/SplicingGraphs/DESCRIPTION
Modified  /trunk/madman/Rpacks/Starr/DESCRIPTION
Modified  /trunk/madman/Rpacks/Streamer/DESCRIPTION
Modified  /trunk/madman/Rpacks/Sushi/DESCRIPTION
Modified  /trunk/madman/Rpacks/SwimR/DESCRIPTION
Modified  /trunk/madman/Rpacks/TCC/DESCRIPTION
Modified  /trunk/madman/Rpacks/TDARACNE/DESCRIPTION
Modified  /trunk/madman/Rpacks/TEQC/DESCRIPTION
Modified  /trunk/madman/Rpacks/TFBSTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/TIN/DESCRIPTION
Modified  /trunk/madman/Rpacks/TPP/DESCRIPTION
Modified  /trunk/madman/Rpacks/TRONCO/DESCRIPTION
Modified  /trunk/madman/Rpacks/TSCAN/DESCRIPTION
Modified  /trunk/madman/Rpacks/TSSi/DESCRIPTION
Modified  /trunk/madman/Rpacks/TargetScore/DESCRIPTION
Modified  /trunk/madman/Rpacks/TargetSearch/DESCRIPTION
Modified  /trunk/madman/Rpacks/TitanCNA/DESCRIPTION
Modified  /trunk/madman/Rpacks/ToPASeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/TransView/DESCRIPTION
Modified  /trunk/madman/Rpacks/TurboNorm/DESCRIPTION
Modified  /trunk/madman/Rpacks/TypeInfo/DESCRIPTION
Modified  /trunk/madman/Rpacks/UNDO/DESCRIPTION
Modified  /trunk/madman/Rpacks/UniProt.ws/DESCRIPTION
Modified  /trunk/madman/Rpacks/VanillaICE/DESCRIPTION
Modified  /trunk/madman/Rpacks/VariantAnnotation/DESCRIPTION
Modified  /trunk/madman/Rpacks/VariantFiltering/DESCRIPTION
Modified  /trunk/madman/Rpacks/VariantTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/Vega/DESCRIPTION
Modified  /trunk/madman/Rpacks/VegaMC/DESCRIPTION
Modified  /trunk/madman/Rpacks/XDE/DESCRIPTION
Modified  /trunk/madman/Rpacks/XVector/DESCRIPTION
Modified  /trunk/madman/Rpacks/a4/DESCRIPTION
Modified  /trunk/madman/Rpacks/a4Base/DESCRIPTION
Modified  /trunk/madman/Rpacks/a4Classif/DESCRIPTION
Modified  /trunk/madman/Rpacks/a4Core/DESCRIPTION
Modified  /trunk/madman/Rpacks/a4Preproc/DESCRIPTION
Modified  /trunk/madman/Rpacks/a4Reporting/DESCRIPTION
Modified  /trunk/madman/Rpacks/aCGH/DESCRIPTION
Modified  /trunk/madman/Rpacks/adSplit/DESCRIPTION
Modified  /trunk/madman/Rpacks/affxparser/DESCRIPTION
Modified  /trunk/madman/Rpacks/affy/DESCRIPTION
Modified  /trunk/madman/Rpacks/affyContam/DESCRIPTION
Modified  /trunk/madman/Rpacks/affyILM/DESCRIPTION
Modified  /trunk/madman/Rpacks/affyPLM/DESCRIPTION
Modified  /trunk/madman/Rpacks/affyPara/DESCRIPTION
Modified  /trunk/madman/Rpacks/affyQCReport/DESCRIPTION
Modified  /trunk/madman/Rpacks/affycomp/DESCRIPTION
Modified  /trunk/madman/Rpacks/affycoretools/DESCRIPTION
Modified  /trunk/madman/Rpacks/affyio/DESCRIPTION
Modified  /trunk/madman/Rpacks/affylmGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/affypdnn/DESCRIPTION
Modified  /trunk/madman/Rpacks/agilp/DESCRIPTION
Modified  /trunk/madman/Rpacks/alsace/DESCRIPTION
Modified  /trunk/madman/Rpacks/altcdfenvs/DESCRIPTION
Modified  /trunk/madman/Rpacks/ampliQueso/DESCRIPTION
Modified  /trunk/madman/Rpacks/annaffy/DESCRIPTION
Modified  /trunk/madman/Rpacks/annmap/DESCRIPTION
Modified  /trunk/madman/Rpacks/annotate/DESCRIPTION
Modified  /trunk/madman/Rpacks/annotationTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/anota/DESCRIPTION
Modified  /trunk/madman/Rpacks/antiProfiles/DESCRIPTION
Modified  /trunk/madman/Rpacks/apComplex/DESCRIPTION
Modified  /trunk/madman/Rpacks/aroma.light/DESCRIPTION
Modified  /trunk/madman/Rpacks/arrayMvout/DESCRIPTION
Modified  /trunk/madman/Rpacks/arrayQuality/DESCRIPTION
Modified  /trunk/madman/Rpacks/arrayQualityMetrics/DESCRIPTION
Modified  /trunk/madman/Rpacks/attract/DESCRIPTION
Modified  /trunk/madman/Rpacks/ballgown/DESCRIPTION
Modified  /trunk/madman/Rpacks/bamsignals/DESCRIPTION
Modified  /trunk/madman/Rpacks/baySeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/beadarray/DESCRIPTION
Modified  /trunk/madman/Rpacks/beadarraySNP/DESCRIPTION
Modified  /trunk/madman/Rpacks/betr/DESCRIPTION
Modified  /trunk/madman/Rpacks/bgafun/DESCRIPTION
Modified  /trunk/madman/Rpacks/bgx/DESCRIPTION
Modified  /trunk/madman/Rpacks/bigmemoryExtras/DESCRIPTION
Modified  /trunk/madman/Rpacks/bioDist/DESCRIPTION
Modified  /trunk/madman/Rpacks/bioassayR/DESCRIPTION
Modified  /trunk/madman/Rpacks/biocGraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/biocViews/DESCRIPTION
Modified  /trunk/madman/Rpacks/biomaRt/DESCRIPTION
Modified  /trunk/madman/Rpacks/biomvRCNS/DESCRIPTION
Modified  /trunk/madman/Rpacks/biosvd/DESCRIPTION
Modified  /trunk/madman/Rpacks/biovizBase/DESCRIPTION
Modified  /trunk/madman/Rpacks/birta/DESCRIPTION
Modified  /trunk/madman/Rpacks/birte/DESCRIPTION
Modified  /trunk/madman/Rpacks/blima/DESCRIPTION
Modified  /trunk/madman/Rpacks/bridge/DESCRIPTION
Modified  /trunk/madman/Rpacks/bsseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/bumphunter/DESCRIPTION
Modified  /trunk/madman/Rpacks/canceR/DESCRIPTION
Modified  /trunk/madman/Rpacks/cancerclass/DESCRIPTION
Modified  /trunk/madman/Rpacks/casper/DESCRIPTION
Modified  /trunk/madman/Rpacks/categoryCompare/DESCRIPTION
Modified  /trunk/madman/Rpacks/ccrepe/DESCRIPTION
Modified  /trunk/madman/Rpacks/cellGrowth/DESCRIPTION
Modified  /trunk/madman/Rpacks/cellHTS/DESCRIPTION
Modified  /trunk/madman/Rpacks/cellHTS2/DESCRIPTION
Modified  /trunk/madman/Rpacks/cghMCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/charm/DESCRIPTION
Modified  /trunk/madman/Rpacks/chimera/DESCRIPTION
Modified  /trunk/madman/Rpacks/chipenrich/DESCRIPTION
Modified  /trunk/madman/Rpacks/chipseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/chopsticks/DESCRIPTION
Modified  /trunk/madman/Rpacks/chroGPS/DESCRIPTION
Modified  /trunk/madman/Rpacks/chromDraw/DESCRIPTION
Modified  /trunk/madman/Rpacks/cisPath/DESCRIPTION
Modified  /trunk/madman/Rpacks/cleanUpdTSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/cleaver/DESCRIPTION
Modified  /trunk/madman/Rpacks/clippda/DESCRIPTION
Modified  /trunk/madman/Rpacks/clipper/DESCRIPTION
Modified  /trunk/madman/Rpacks/clonotypeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/clst/DESCRIPTION
Modified  /trunk/madman/Rpacks/clstutils/DESCRIPTION
Modified  /trunk/madman/Rpacks/clusterProfiler/DESCRIPTION
Modified  /trunk/madman/Rpacks/clusterStab/DESCRIPTION
Modified  /trunk/madman/Rpacks/cn.farms/DESCRIPTION
Modified  /trunk/madman/Rpacks/cn.mops/DESCRIPTION
Modified  /trunk/madman/Rpacks/cnvGSA/DESCRIPTION
Modified  /trunk/madman/Rpacks/coGPS/DESCRIPTION
Modified  /trunk/madman/Rpacks/coMET/DESCRIPTION
Modified  /trunk/madman/Rpacks/coRNAi/DESCRIPTION
Modified  /trunk/madman/Rpacks/cobindR/DESCRIPTION
Modified  /trunk/madman/Rpacks/codelink/DESCRIPTION
Modified  /trunk/madman/Rpacks/cogena/DESCRIPTION
Modified  /trunk/madman/Rpacks/compEpiTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/compcodeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/conumee/DESCRIPTION
Modified  /trunk/madman/Rpacks/convert/DESCRIPTION
Modified  /trunk/madman/Rpacks/copa/DESCRIPTION
Modified  /trunk/madman/Rpacks/copynumber/DESCRIPTION
Modified  /trunk/madman/Rpacks/cosmiq/DESCRIPTION
Modified  /trunk/madman/Rpacks/cpvSNP/DESCRIPTION
Modified  /trunk/madman/Rpacks/cqn/DESCRIPTION
Modified  /trunk/madman/Rpacks/crlmm/DESCRIPTION
Modified  /trunk/madman/Rpacks/csaw/DESCRIPTION
Modified  /trunk/madman/Rpacks/ctc/DESCRIPTION
Modified  /trunk/madman/Rpacks/cummeRbund/DESCRIPTION
Modified  /trunk/madman/Rpacks/customProDB/DESCRIPTION
Modified  /trunk/madman/Rpacks/cycle/DESCRIPTION
Modified  /trunk/madman/Rpacks/cytofkit/DESCRIPTION
Modified  /trunk/madman/Rpacks/daMA/DESCRIPTION
Modified  /trunk/madman/Rpacks/dagLogo/DESCRIPTION
Modified  /trunk/madman/Rpacks/ddCt/DESCRIPTION
Modified  /trunk/madman/Rpacks/ddgraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/deepSNV/DESCRIPTION
Modified  /trunk/madman/Rpacks/deltaGseg/DESCRIPTION
Modified  /trunk/madman/Rpacks/derfinder/DESCRIPTION
Modified  /trunk/madman/Rpacks/derfinderHelper/DESCRIPTION
Modified  /trunk/madman/Rpacks/derfinderPlot/DESCRIPTION
Modified  /trunk/madman/Rpacks/dexus/DESCRIPTION
Modified  /trunk/madman/Rpacks/diffGeneAnalysis/DESCRIPTION
Modified  /trunk/madman/Rpacks/diffHic/DESCRIPTION
Modified  /trunk/madman/Rpacks/diggit/DESCRIPTION
Modified  /trunk/madman/Rpacks/dks/DESCRIPTION
Modified  /trunk/madman/Rpacks/domainsignatures/DESCRIPTION
Modified  /trunk/madman/Rpacks/dualKS/DESCRIPTION
Modified  /trunk/madman/Rpacks/dyebias/DESCRIPTION
Modified  /trunk/madman/Rpacks/easyRNASeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/ecolitk/DESCRIPTION
Modified  /trunk/madman/Rpacks/edge/DESCRIPTION
Modified  /trunk/madman/Rpacks/edgeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/eiR/DESCRIPTION
Modified  /trunk/madman/Rpacks/eisa/DESCRIPTION
Modified  /trunk/madman/Rpacks/ensemblVEP/DESCRIPTION
Modified  /trunk/madman/Rpacks/ensembldb/DESCRIPTION
Modified  /trunk/madman/Rpacks/epigenomix/DESCRIPTION
Modified  /trunk/madman/Rpacks/epivizr/DESCRIPTION
Modified  /trunk/madman/Rpacks/erccdashboard/DESCRIPTION
Modified  /trunk/madman/Rpacks/exomeCopy/DESCRIPTION
Modified  /trunk/madman/Rpacks/exomePeak/DESCRIPTION
Modified  /trunk/madman/Rpacks/explorase/DESCRIPTION
Modified  /trunk/madman/Rpacks/fabia/DESCRIPTION
Modified  /trunk/madman/Rpacks/facopy/DESCRIPTION
Modified  /trunk/madman/Rpacks/factDesign/DESCRIPTION
Modified  /trunk/madman/Rpacks/farms/DESCRIPTION
Modified  /trunk/madman/Rpacks/fastLiquidAssociation/DESCRIPTION
Modified  /trunk/madman/Rpacks/fastseg/DESCRIPTION
Modified  /trunk/madman/Rpacks/fdrame/DESCRIPTION
Modified  /trunk/madman/Rpacks/ffpe/DESCRIPTION
Modified  /trunk/madman/Rpacks/flagme/DESCRIPTION
Modified  /trunk/madman/Rpacks/flipflop/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowBeads/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowBin/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowCHIC/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowCL/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowClean/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowClust/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowCore/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowCyBar/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowDensity/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowFP/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowFit/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowMap/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowMatch/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowMeans/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowMerge/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowPeaks/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowPlots/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowQ/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowQB/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowStats/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowTrans/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowType/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowUtils/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowVS/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowViz/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowWorkspace/DESCRIPTION
Modified  /trunk/madman/Rpacks/flowcatchR/DESCRIPTION
Modified  /trunk/madman/Rpacks/fmcsR/DESCRIPTION
Modified  /trunk/madman/Rpacks/focalCall/DESCRIPTION
Modified  /trunk/madman/Rpacks/frma/DESCRIPTION
Modified  /trunk/madman/Rpacks/frmaTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/gCMAP/DESCRIPTION
Modified  /trunk/madman/Rpacks/gCMAPWeb/DESCRIPTION
Modified  /trunk/madman/Rpacks/gQTLBase/DESCRIPTION
Modified  /trunk/madman/Rpacks/gQTLstats/DESCRIPTION
Modified  /trunk/madman/Rpacks/gaga/DESCRIPTION
Modified  /trunk/madman/Rpacks/gage/DESCRIPTION
Modified  /trunk/madman/Rpacks/gaggle/DESCRIPTION
Modified  /trunk/madman/Rpacks/gaia/DESCRIPTION
Modified  /trunk/madman/Rpacks/gaucho/DESCRIPTION
Modified  /trunk/madman/Rpacks/gcrma/DESCRIPTION
Modified  /trunk/madman/Rpacks/gdsfmt/DESCRIPTION
Modified  /trunk/madman/Rpacks/geNetClassifier/DESCRIPTION
Modified  /trunk/madman/Rpacks/geecc/DESCRIPTION
Modified  /trunk/madman/Rpacks/genArise/DESCRIPTION
Modified  /trunk/madman/Rpacks/geneRecommender/DESCRIPTION
Modified  /trunk/madman/Rpacks/geneRxCluster/DESCRIPTION
Modified  /trunk/madman/Rpacks/genefilter/DESCRIPTION
Modified  /trunk/madman/Rpacks/genefu/DESCRIPTION
Modified  /trunk/madman/Rpacks/geneplotter/DESCRIPTION
Modified  /trunk/madman/Rpacks/genoCN/DESCRIPTION
Modified  /trunk/madman/Rpacks/genomation/DESCRIPTION
Modified  /trunk/madman/Rpacks/genomeIntervals/DESCRIPTION
Modified  /trunk/madman/Rpacks/genomes/DESCRIPTION
Modified  /trunk/madman/Rpacks/genoset/DESCRIPTION
Modified  /trunk/madman/Rpacks/gespeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ggbio/DESCRIPTION
Modified  /trunk/madman/Rpacks/ggtree/DESCRIPTION
Modified  /trunk/madman/Rpacks/girafe/DESCRIPTION
Modified  /trunk/madman/Rpacks/globaltest/DESCRIPTION
Modified  /trunk/madman/Rpacks/gmapR/DESCRIPTION
Modified  /trunk/madman/Rpacks/goProfiles/DESCRIPTION
Modified  /trunk/madman/Rpacks/goTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/goseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/gpls/DESCRIPTION
Modified  /trunk/madman/Rpacks/gprege/DESCRIPTION
Modified  /trunk/madman/Rpacks/graph/DESCRIPTION
Modified  /trunk/madman/Rpacks/graphite/DESCRIPTION
Modified  /trunk/madman/Rpacks/groHMM/DESCRIPTION
Modified  /trunk/madman/Rpacks/gtrellis/DESCRIPTION
Modified  /trunk/madman/Rpacks/gwascat/DESCRIPTION
Modified  /trunk/madman/Rpacks/h5vc/DESCRIPTION
Modified  /trunk/madman/Rpacks/hapFabia/DESCRIPTION
Modified  /trunk/madman/Rpacks/hiAnnotator/DESCRIPTION
Modified  /trunk/madman/Rpacks/hiReadsProcessor/DESCRIPTION
Modified  /trunk/madman/Rpacks/hopach/DESCRIPTION
Modified  /trunk/madman/Rpacks/hpar/DESCRIPTION
Modified  /trunk/madman/Rpacks/htSeqTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/hyperdraw/DESCRIPTION
Modified  /trunk/madman/Rpacks/hypergraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/iASeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/iBBiG/DESCRIPTION
Modified  /trunk/madman/Rpacks/iBMQ/DESCRIPTION
Modified  /trunk/madman/Rpacks/iChip/DESCRIPTION
Modified  /trunk/madman/Rpacks/iClusterPlus/DESCRIPTION
Modified  /trunk/madman/Rpacks/iPAC/DESCRIPTION
Modified  /trunk/madman/Rpacks/iSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/ibh/DESCRIPTION
Modified  /trunk/madman/Rpacks/idiogram/DESCRIPTION
Modified  /trunk/madman/Rpacks/illuminaio/DESCRIPTION
Modified  /trunk/madman/Rpacks/imageHTS/DESCRIPTION
Modified  /trunk/madman/Rpacks/immunoClust/DESCRIPTION
Modified  /trunk/madman/Rpacks/impute/DESCRIPTION
Modified  /trunk/madman/Rpacks/inSilicoDb/DESCRIPTION
Modified  /trunk/madman/Rpacks/inSilicoMerging/DESCRIPTION
Modified  /trunk/madman/Rpacks/intansv/DESCRIPTION
Modified  /trunk/madman/Rpacks/interactiveDisplay/DESCRIPTION
Modified  /trunk/madman/Rpacks/interactiveDisplayBase/DESCRIPTION
Modified  /trunk/madman/Rpacks/inveRsion/DESCRIPTION
Modified  /trunk/madman/Rpacks/iontree/DESCRIPTION
Modified  /trunk/madman/Rpacks/isobar/DESCRIPTION
Modified  /trunk/madman/Rpacks/iterativeBMA/DESCRIPTION
Modified  /trunk/madman/Rpacks/iterativeBMAsurv/DESCRIPTION
Modified  /trunk/madman/Rpacks/jmosaics/DESCRIPTION
Modified  /trunk/madman/Rpacks/joda/DESCRIPTION
Modified  /trunk/madman/Rpacks/kebabs/DESCRIPTION
Modified  /trunk/madman/Rpacks/keggorthology/DESCRIPTION
Modified  /trunk/madman/Rpacks/lapmix/DESCRIPTION
Modified  /trunk/madman/Rpacks/les/DESCRIPTION
Modified  /trunk/madman/Rpacks/limma/DESCRIPTION
Modified  /trunk/madman/Rpacks/limmaGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/lmdme/DESCRIPTION
Modified  /trunk/madman/Rpacks/logicFS/DESCRIPTION
Modified  /trunk/madman/Rpacks/logitT/DESCRIPTION
Modified  /trunk/madman/Rpacks/lol/DESCRIPTION
Modified  /trunk/madman/Rpacks/lpNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/lumi/DESCRIPTION
Modified  /trunk/madman/Rpacks/mAPKL/DESCRIPTION
Modified  /trunk/madman/Rpacks/mBPCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/mQTL.NMR/DESCRIPTION
Modified  /trunk/madman/Rpacks/maCorrPlot/DESCRIPTION
Modified  /trunk/madman/Rpacks/maPredictDSC/DESCRIPTION
Modified  /trunk/madman/Rpacks/maSigPro/DESCRIPTION
Modified  /trunk/madman/Rpacks/maanova/DESCRIPTION
Modified  /trunk/madman/Rpacks/macat/DESCRIPTION
Modified  /trunk/madman/Rpacks/made4/DESCRIPTION
Modified  /trunk/madman/Rpacks/maigesPack/DESCRIPTION
Modified  /trunk/madman/Rpacks/makecdfenv/DESCRIPTION
Modified  /trunk/madman/Rpacks/manta/DESCRIPTION
Modified  /trunk/madman/Rpacks/marray/DESCRIPTION
Modified  /trunk/madman/Rpacks/maskBAD/DESCRIPTION
Modified  /trunk/madman/Rpacks/massiR/DESCRIPTION
Modified  /trunk/madman/Rpacks/matchBox/DESCRIPTION
Modified  /trunk/madman/Rpacks/mcaGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/mdgsa/DESCRIPTION
Modified  /trunk/madman/Rpacks/mdqc/DESCRIPTION
Modified  /trunk/madman/Rpacks/meshr/DESCRIPTION
Modified  /trunk/madman/Rpacks/messina/DESCRIPTION
Modified  /trunk/madman/Rpacks/metaArray/DESCRIPTION
Modified  /trunk/madman/Rpacks/metaMS/DESCRIPTION
Modified  /trunk/madman/Rpacks/metaSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/metabomxtr/DESCRIPTION
Modified  /trunk/madman/Rpacks/metagene/DESCRIPTION
Modified  /trunk/madman/Rpacks/metagenomeSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/metahdep/DESCRIPTION
Modified  /trunk/madman/Rpacks/metaseqR/DESCRIPTION
Modified  /trunk/madman/Rpacks/methVisual/DESCRIPTION
Modified  /trunk/madman/Rpacks/methyAnalysis/DESCRIPTION
Modified  /trunk/madman/Rpacks/methylMnM/DESCRIPTION
Modified  /trunk/madman/Rpacks/methylPipe/DESCRIPTION
Modified  /trunk/madman/Rpacks/methylumi/DESCRIPTION
Modified  /trunk/madman/Rpacks/mgsa/DESCRIPTION
Modified  /trunk/madman/Rpacks/miRNApath/DESCRIPTION
Modified  /trunk/madman/Rpacks/miRNAtap/DESCRIPTION
Modified  /trunk/madman/Rpacks/microRNA/DESCRIPTION
Modified  /trunk/madman/Rpacks/minet/DESCRIPTION
Modified  /trunk/madman/Rpacks/minfi/DESCRIPTION
Modified  /trunk/madman/Rpacks/missMethyl/DESCRIPTION
Modified  /trunk/madman/Rpacks/mitoODE/DESCRIPTION
Modified  /trunk/madman/Rpacks/mmnet/DESCRIPTION
Modified  /trunk/madman/Rpacks/mogsa/DESCRIPTION
Modified  /trunk/madman/Rpacks/monocle/DESCRIPTION
Modified  /trunk/madman/Rpacks/mosaics/DESCRIPTION
Modified  /trunk/madman/Rpacks/motifRG/DESCRIPTION
Modified  /trunk/madman/Rpacks/motifStack/DESCRIPTION
Modified  /trunk/madman/Rpacks/msa/DESCRIPTION
Modified  /trunk/madman/Rpacks/msmsEDA/DESCRIPTION
Modified  /trunk/madman/Rpacks/msmsTests/DESCRIPTION
Modified  /trunk/madman/Rpacks/multiscan/DESCRIPTION
Modified  /trunk/madman/Rpacks/multtest/DESCRIPTION
Modified  /trunk/madman/Rpacks/muscle/DESCRIPTION
Modified  /trunk/madman/Rpacks/mvGST/DESCRIPTION
Modified  /trunk/madman/Rpacks/mygene/DESCRIPTION
Modified  /trunk/madman/Rpacks/mzID/DESCRIPTION
Modified  /trunk/madman/Rpacks/mzR/DESCRIPTION
Modified  /trunk/madman/Rpacks/ncdfFlow/DESCRIPTION
Modified  /trunk/madman/Rpacks/neaGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/nem/DESCRIPTION
Modified  /trunk/madman/Rpacks/netbenchmark/DESCRIPTION
Modified  /trunk/madman/Rpacks/netbiov/DESCRIPTION
Modified  /trunk/madman/Rpacks/nethet/DESCRIPTION
Modified  /trunk/madman/Rpacks/netresponse/DESCRIPTION
Modified  /trunk/madman/Rpacks/networkBMA/DESCRIPTION
Modified  /trunk/madman/Rpacks/nnNorm/DESCRIPTION
Modified  /trunk/madman/Rpacks/nondetects/DESCRIPTION
Modified  /trunk/madman/Rpacks/npGSEA/DESCRIPTION
Modified  /trunk/madman/Rpacks/nucleR/DESCRIPTION
Modified  /trunk/madman/Rpacks/nudge/DESCRIPTION
Modified  /trunk/madman/Rpacks/occugene/DESCRIPTION
Modified  /trunk/madman/Rpacks/oligo/DESCRIPTION
Modified  /trunk/madman/Rpacks/oligoClasses/DESCRIPTION
Modified  /trunk/madman/Rpacks/omicade4/DESCRIPTION
Modified  /trunk/madman/Rpacks/oneChannelGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/ontoCAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/openCyto/DESCRIPTION
Modified  /trunk/madman/Rpacks/oposSOM/DESCRIPTION
Modified  /trunk/madman/Rpacks/pRoloc/DESCRIPTION
Modified  /trunk/madman/Rpacks/pRolocGUI/DESCRIPTION
Modified  /trunk/madman/Rpacks/paircompviz/DESCRIPTION
Modified  /trunk/madman/Rpacks/pandaR/DESCRIPTION
Modified  /trunk/madman/Rpacks/panp/DESCRIPTION
Modified  /trunk/madman/Rpacks/parglms/DESCRIPTION
Modified  /trunk/madman/Rpacks/parody/DESCRIPTION
Modified  /trunk/madman/Rpacks/pathRender/DESCRIPTION
Modified  /trunk/madman/Rpacks/pathifier/DESCRIPTION
Modified  /trunk/madman/Rpacks/pathview/DESCRIPTION
Modified  /trunk/madman/Rpacks/paxtoolsr/DESCRIPTION
Modified  /trunk/madman/Rpacks/pcaGoPromoter/DESCRIPTION
Modified  /trunk/madman/Rpacks/pcaMethods/DESCRIPTION
Modified  /trunk/madman/Rpacks/pcot2/DESCRIPTION
Modified  /trunk/madman/Rpacks/pdInfoBuilder/DESCRIPTION
Modified  /trunk/madman/Rpacks/pdmclass/DESCRIPTION
Modified  /trunk/madman/Rpacks/pepStat/DESCRIPTION
Modified  /trunk/madman/Rpacks/pepXMLTab/DESCRIPTION
Modified  /trunk/madman/Rpacks/phenoDist/DESCRIPTION
Modified  /trunk/madman/Rpacks/phenoTest/DESCRIPTION
Modified  /trunk/madman/Rpacks/phyloseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/piano/DESCRIPTION
Modified  /trunk/madman/Rpacks/pickgene/DESCRIPTION
Modified  /trunk/madman/Rpacks/pint/DESCRIPTION
Modified  /trunk/madman/Rpacks/pkgDepTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/plateCore/DESCRIPTION
Modified  /trunk/madman/Rpacks/plethy/DESCRIPTION
Modified  /trunk/madman/Rpacks/plgem/DESCRIPTION
Modified  /trunk/madman/Rpacks/plier/DESCRIPTION
Modified  /trunk/madman/Rpacks/plrs/DESCRIPTION
Modified  /trunk/madman/Rpacks/plw/DESCRIPTION
Modified  /trunk/madman/Rpacks/pmm/DESCRIPTION
Modified  /trunk/madman/Rpacks/podkat/DESCRIPTION
Modified  /trunk/madman/Rpacks/polyester/DESCRIPTION
Modified  /trunk/madman/Rpacks/ppiStats/DESCRIPTION
Modified  /trunk/madman/Rpacks/prada/DESCRIPTION
Modified  /trunk/madman/Rpacks/prebs/DESCRIPTION
Modified  /trunk/madman/Rpacks/predictionet/DESCRIPTION
Modified  /trunk/madman/Rpacks/preprocessCore/DESCRIPTION
Modified  /trunk/madman/Rpacks/proBAMr/DESCRIPTION
Modified  /trunk/madman/Rpacks/procoil/DESCRIPTION
Modified  /trunk/madman/Rpacks/prot2D/DESCRIPTION
Modified  /trunk/madman/Rpacks/proteinProfiles/DESCRIPTION
Modified  /trunk/madman/Rpacks/proteoQC/DESCRIPTION
Modified  /trunk/madman/Rpacks/puma/DESCRIPTION
Modified  /trunk/madman/Rpacks/pvac/DESCRIPTION
Modified  /trunk/madman/Rpacks/pvca/DESCRIPTION
Modified  /trunk/madman/Rpacks/pwOmics/DESCRIPTION
Modified  /trunk/madman/Rpacks/qcmetrics/DESCRIPTION
Modified  /trunk/madman/Rpacks/qpcrNorm/DESCRIPTION
Modified  /trunk/madman/Rpacks/qpgraph/DESCRIPTION
Modified  /trunk/madman/Rpacks/qrqc/DESCRIPTION
Modified  /trunk/madman/Rpacks/quantro/DESCRIPTION
Modified  /trunk/madman/Rpacks/quantsmooth/DESCRIPTION
Modified  /trunk/madman/Rpacks/qusage/DESCRIPTION
Modified  /trunk/madman/Rpacks/qvalue/DESCRIPTION
Modified  /trunk/madman/Rpacks/r3Cseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/rBiopaxParser/DESCRIPTION
Modified  /trunk/madman/Rpacks/rGADEM/DESCRIPTION
Modified  /trunk/madman/Rpacks/rGREAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/rHVDM/DESCRIPTION
Modified  /trunk/madman/Rpacks/rMAT/DESCRIPTION
Modified  /trunk/madman/Rpacks/rRDP/DESCRIPTION
Modified  /trunk/madman/Rpacks/rSFFreader/DESCRIPTION
Modified  /trunk/madman/Rpacks/rTANDEM/DESCRIPTION
Modified  /trunk/madman/Rpacks/rTRM/DESCRIPTION
Modified  /trunk/madman/Rpacks/rTRMui/DESCRIPTION
Modified  /trunk/madman/Rpacks/rain/DESCRIPTION
Modified  /trunk/madman/Rpacks/rama/DESCRIPTION
Modified  /trunk/madman/Rpacks/randPack/DESCRIPTION
Modified  /trunk/madman/Rpacks/rbsurv/DESCRIPTION
Modified  /trunk/madman/Rpacks/rcellminer/DESCRIPTION
Modified  /trunk/madman/Rpacks/reb/DESCRIPTION
Modified  /trunk/madman/Rpacks/regionReport/DESCRIPTION
Modified  /trunk/madman/Rpacks/regioneR/DESCRIPTION
Modified  /trunk/madman/Rpacks/rfPred/DESCRIPTION
Modified  /trunk/madman/Rpacks/rgsepd/DESCRIPTION
Modified  /trunk/madman/Rpacks/rhdf5/DESCRIPTION
Modified  /trunk/madman/Rpacks/riboSeqR/DESCRIPTION
Modified  /trunk/madman/Rpacks/rnaSeqMap/DESCRIPTION
Modified  /trunk/madman/Rpacks/roar/DESCRIPTION
Modified  /trunk/madman/Rpacks/rols/DESCRIPTION
Modified  /trunk/madman/Rpacks/rpx/DESCRIPTION
Modified  /trunk/madman/Rpacks/rqubic/DESCRIPTION
Modified  /trunk/madman/Rpacks/rsbml/DESCRIPTION
Modified  /trunk/madman/Rpacks/rtracklayer/DESCRIPTION
Modified  /trunk/madman/Rpacks/sRAP/DESCRIPTION
Modified  /trunk/madman/Rpacks/sSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/safe/DESCRIPTION
Modified  /trunk/madman/Rpacks/sagenhaft/DESCRIPTION
Modified  /trunk/madman/Rpacks/sangerseqR/DESCRIPTION
Modified  /trunk/madman/Rpacks/sapFinder/DESCRIPTION
Modified  /trunk/madman/Rpacks/saps/DESCRIPTION
Modified  /trunk/madman/Rpacks/savR/DESCRIPTION
Modified  /trunk/madman/Rpacks/scsR/DESCRIPTION
Modified  /trunk/madman/Rpacks/segmentSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/seq2pathway/DESCRIPTION
Modified  /trunk/madman/Rpacks/seqCNA/DESCRIPTION
Modified  /trunk/madman/Rpacks/seqLogo/DESCRIPTION
Modified  /trunk/madman/Rpacks/seqPattern/DESCRIPTION
Modified  /trunk/madman/Rpacks/seqTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/seqbias/DESCRIPTION
Modified  /trunk/madman/Rpacks/seqplots/DESCRIPTION
Modified  /trunk/madman/Rpacks/shinyMethyl/DESCRIPTION
Modified  /trunk/madman/Rpacks/shinyTANDEM/DESCRIPTION
Modified  /trunk/madman/Rpacks/sigPathway/DESCRIPTION
Modified  /trunk/madman/Rpacks/sigaR/DESCRIPTION
Modified  /trunk/madman/Rpacks/siggenes/DESCRIPTION
Modified  /trunk/madman/Rpacks/sigsquared/DESCRIPTION
Modified  /trunk/madman/Rpacks/similaRpeak/DESCRIPTION
Modified  /trunk/madman/Rpacks/simpleaffy/DESCRIPTION
Modified  /trunk/madman/Rpacks/simulatorZ/DESCRIPTION
Modified  /trunk/madman/Rpacks/sincell/DESCRIPTION
Modified  /trunk/madman/Rpacks/sizepower/DESCRIPTION
Modified  /trunk/madman/Rpacks/skewr/DESCRIPTION
Modified  /trunk/madman/Rpacks/snapCGH/DESCRIPTION
Modified  /trunk/madman/Rpacks/snm/DESCRIPTION
Modified  /trunk/madman/Rpacks/snpStats/DESCRIPTION
Modified  /trunk/madman/Rpacks/soGGi/DESCRIPTION
Modified  /trunk/madman/Rpacks/spade/DESCRIPTION
Modified  /trunk/madman/Rpacks/specL/DESCRIPTION
Modified  /trunk/madman/Rpacks/spikeLI/DESCRIPTION
Modified  /trunk/madman/Rpacks/spkTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/spliceR/DESCRIPTION
Modified  /trunk/madman/Rpacks/spliceSites/DESCRIPTION
Modified  /trunk/madman/Rpacks/splicegear/DESCRIPTION
Modified  /trunk/madman/Rpacks/splots/DESCRIPTION
Modified  /trunk/madman/Rpacks/spotSegmentation/DESCRIPTION
Modified  /trunk/madman/Rpacks/sscore/DESCRIPTION
Modified  /trunk/madman/Rpacks/ssize/DESCRIPTION
Modified  /trunk/madman/Rpacks/ssviz/DESCRIPTION
Modified  /trunk/madman/Rpacks/staRank/DESCRIPTION
Modified  /trunk/madman/Rpacks/stepNorm/DESCRIPTION
Modified  /trunk/madman/Rpacks/stepwiseCM/DESCRIPTION
Modified  /trunk/madman/Rpacks/supraHex/DESCRIPTION
Modified  /trunk/madman/Rpacks/survcomp/DESCRIPTION
Modified  /trunk/madman/Rpacks/sva/DESCRIPTION
Modified  /trunk/madman/Rpacks/switchBox/DESCRIPTION
Modified  /trunk/madman/Rpacks/synapter/DESCRIPTION
Modified  /trunk/madman/Rpacks/systemPipeR/DESCRIPTION
Modified  /trunk/madman/Rpacks/tRanslatome/DESCRIPTION
Modified  /trunk/madman/Rpacks/ternarynet/DESCRIPTION
Modified  /trunk/madman/Rpacks/tigre/DESCRIPTION
Modified  /trunk/madman/Rpacks/tilingArray/DESCRIPTION
Modified  /trunk/madman/Rpacks/timecourse/DESCRIPTION
Modified  /trunk/madman/Rpacks/tkWidgets/DESCRIPTION
Modified  /trunk/madman/Rpacks/topGO/DESCRIPTION
Modified  /trunk/madman/Rpacks/trackViewer/DESCRIPTION
Modified  /trunk/madman/Rpacks/tracktables/DESCRIPTION
Modified  /trunk/madman/Rpacks/triform/DESCRIPTION
Modified  /trunk/madman/Rpacks/trigger/DESCRIPTION
Modified  /trunk/madman/Rpacks/trio/DESCRIPTION
Modified  /trunk/madman/Rpacks/triplex/DESCRIPTION
Modified  /trunk/madman/Rpacks/tspair/DESCRIPTION
Modified  /trunk/madman/Rpacks/tweeDEseq/DESCRIPTION
Modified  /trunk/madman/Rpacks/twilight/DESCRIPTION
Modified  /trunk/madman/Rpacks/unifiedWMWqPCR/DESCRIPTION
Modified  /trunk/madman/Rpacks/vbmp/DESCRIPTION
Modified  /trunk/madman/Rpacks/viper/DESCRIPTION
Modified  /trunk/madman/Rpacks/vsn/DESCRIPTION
Modified  /trunk/madman/Rpacks/vtpnet/DESCRIPTION
Modified  /trunk/madman/Rpacks/wateRmelon/DESCRIPTION
Modified  /trunk/madman/Rpacks/wavClusteR/DESCRIPTION
Modified  /trunk/madman/Rpacks/waveTiling/DESCRIPTION
Modified  /trunk/madman/Rpacks/weaver/DESCRIPTION
Modified  /trunk/madman/Rpacks/webbioc/DESCRIPTION
Modified  /trunk/madman/Rpacks/widgetTools/DESCRIPTION
Modified  /trunk/madman/Rpacks/xcms/DESCRIPTION
Modified  /trunk/madman/Rpacks/xmapbridge/DESCRIPTION
Modified  /trunk/madman/Rpacks/xps/DESCRIPTION
Modified  /trunk/madman/Rpacks/yaqcaffy/DESCRIPTION
Modified  /trunk/madman/Rpacks/zlibbioc/DESCRIPTION
Bump versions prior to creating 3.1 branch.
Revision: 102590
Author: hpages
Date: 2015-04-16T19:41:50+00:00
Paths:
Modified  /trunk/madman/Rpacks/IRanges/man/NCList-class.Rd
fix small markup problem
Revision: 102589
Author: d.tenenbaum
Date: 2015-04-16T19:40:02+00:00
Paths:
Modified  /trunk/madman/Rpacks/agilp/DESCRIPTION
fix version number
Revision: 102588
Author: d.tenenbaum
Date: 2015-04-16T19:38:01+00:00
Paths:
Modified  /trunk/madman/Rpacks/DEGreport/DESCRIPTION
Modified  /trunk/madman/Rpacks/MLSeq/DESCRIPTION
Modified  /trunk/madman/Rpacks/blima/DESCRIPTION
Modified  /trunk/madman/Rpacks/regioneR/DESCRIPTION
Modified  /trunk/madman/Rpacks/sincell/DESCRIPTION
fix version numbers
Revision: 102587
Author: hpages
Date: 2015-04-16T19:37:57+00:00
Paths:
Added  /trunk/madman/Rpacks/IRanges/man/NCList-class.Rd
add man page for Nested Containment List objects
Revision: 102586
Author: d.tenenbaum
Date: 2015-04-16T19:36:42+00:00
Paths:
Modified  /trunk/madman/Rpacks/ncdfFlow/DESCRIPTION
fix version #
Revision: 102584
Author: d.tenenbaum
Date: 2015-04-16T18:55:54+00:00
Paths:
Modified  /trunk/madman/Rpacks/canceR/NEWS
fix NEWS file formatting
Revision: 102583
Author: hpages
Date: 2015-04-16T18:46:01+00:00
Paths:
Modified  /trunk/madman/Rpacks/GenomeInfoDb/DESCRIPTION
Modified  /trunk/madman/Rpacks/GenomeInfoDb/R/rankSeqlevels.R
oops, fix regression introduced in last commit
Revision: 102582
Author: s.gogarten
Date: 2015-04-16T18:26:19+00:00
Paths:
Modified  /trunk/madman/Rpacks/GWASTools/R/assocRegression.R
bug fix - forgot to uncomment tryCatch after debugging
Revision: 102581
Author: d.tenenbaum
Date: 2015-04-16T18:25:46+00:00
Paths:
Modified  /trunk/madman/Rpacks/AnnotationHub/NEWS
fix formatting of NEWS file, fix typo
Revision: 102580
Author: z.xu
Date: 2015-04-16T17:29:36+00:00
Paths:
Modified  /trunk/madman/Rpacks/ENmix/DESCRIPTION
Commit made by the Bioconductor Git-SVN bridge.

Commit id: a10dc153e5795208a0319f50b82c6c5c045d36a1

    commit1

Revision: 102579
Author: z.xu
Date: 2015-04-16T17:17:10+00:00
Paths:
Modified  /trunk/madman/Rpacks/ENmix/DESCRIPTION
Commit made by the Bioconductor Git-SVN bridge.

Commit id: ed9aeba77e4fe26f34cb3709f0eac83ad7f27f20

    Update DESCRIPTION

Revision: 102578
Author: z.xu
Date: 2015-04-16T17:06:09+00:00
Paths:
Deleted  /trunk/madman/Rpacks/ENmix/readme
Commit made by the Bioconductor Git-SVN bridge.

Commit id: f6d7a7291f3da785da5d0b83c923b87c8eb2c8ab

    commit1

Revision: 102577
Author: z.xu
Date: 2015-04-16T17:02:21+00:00
Paths:
Added  /trunk/madman/Rpacks/ENmix/readme
Commit made by the Bioconductor Git-SVN bridge.

Commit id: c55ffceff6dc433253e897dcd48240f0b25bd1f1

    commit1

Revision: 102576
Author: z.xu
Date: 2015-04-16T16:50:34+00:00
Paths:
Added  /trunk/madman/Rpacks/ENmix/DESCRIPTION
setting up git-svn bridge
Revision: 102575
Author: j.lugo
Date: 2015-04-16T16:40:58+00:00
Paths:
Modified  /trunk/madman/Rpacks/cnvGSA/R/enrFiles.R
Commit made by the Bioconductor Git-SVN bridge.

Commit id: 8fb53d9ac188ea4a22f56232f56df32d2f6d8d2c

    Added check to enrFiles.R

Revision: 102574
Author: j.lugo
Date: 2015-04-16T16:27:03+00:00
Paths:
Modified  /trunk/madman/Rpacks/cnvGSA/R/cnvGSAviz.R
Commit made by the Bioconductor Git-SVN bridge.

Commit id: 9580343f766fe024ec2a6c3cc5d9d86fea5fda0d

    Fixed Viz ylim issue

Revision: 102573
Author: r.nicolle
Date: 2015-04-16T15:48:39+00:00
Paths:
Modified  /trunk/madman/Rpacks/CoRegNet/DESCRIPTION
Modified  /trunk/madman/Rpacks/CoRegNet/vignettes/CoRegNet.Rmd
Modified  /trunk/madman/Rpacks/CoRegNet/vignettes/CoRegNet.html
Commit made by the Bioconductor Git-SVN bridge.

Commit id: d715720ec5c20fe65f23b4639e0119c3a1920370

    last comit before submission

Revision: 102572
Author: j.lugo
Date: 2015-04-16T15:02:46+00:00
Paths:
Modified  /trunk/madman/Rpacks/cnvGSA/R/cnvGSAviz.R
Modified  /trunk/madman/Rpacks/cnvGSA/R/enrFiles.R
Commit made by the Bioconductor Git-SVN bridge.

Commit id: c0d796e2cbbaabdde86cfaad70158b50ea9d0c61

    Fixed Kl option

Revision: 102571
Author: k.mezhoud
Date: 2015-04-16T14:35:56+00:00
Paths:
Modified  /trunk/madman/Rpacks/canceR/DESCRIPTION
Modified  /trunk/madman/Rpacks/canceR/NEWS
Modified  /trunk/madman/Rpacks/canceR/R/getMutData.R
Modified  /trunk/madman/Rpacks/canceR/R/getProfilesDataMultipleGenes.R
Commit made by the Bioconductor Git-SVN bridge.

Commit id: 5dfcd761b7b68428a448db0f6d89eb183e0c2195

    Merge branch 'master' of github.com:kmezhoud/canceR

    Conflicts:
    	NEWS


Commit id: 11582242df58c4cc108c9ec8d4652909d0d6700e

    add test

Revision: 102570
Author: j.lugo
Date: 2015-04-16T14:00:36+00:00
Paths:
Modified  /trunk/madman/Rpacks/cnvGSA/R/cnvGSA.R
Commit made by the Bioconductor Git-SVN bridge.

Commit id: ee75269c6733e4c9f4732fb4a09affba3d6d33e5

    Fixed export to file

Revision: 102569
Author: z.xu
Date: 2015-04-16T13:31:10+00:00
Paths:
Deleted  /trunk/madman/Rpacks/ENmix/test
Commit made by the Bioconductor Git-SVN bridge.

Commit id: a861efcfd73a7b06c553a0b6c49dadf1517d48dc

    Merge branch 'master' of github.com:xuz1/ENmix


Commit id: e71c414d8f81140d086ff6f04aa727f8cef1b3a9

    Delete test

Revision: 102568
Author: z.xu
Date: 2015-04-16T13:27:43+00:00
Paths:
Added  /trunk/madman/Rpacks/ENmix/test
Commit made by the Bioconductor Git-SVN bridge.

Commit id: feff652e4a324066748a40820cb0ff1133da0ba6

    Merge branch 'master' of github.com:xuz1/ENmix


Commit id: 565bfb3b74d2d74427b282fae1cb8d7efa0acaa7

    Create test

Revision: 102567
Author: z.xu
Date: 2015-04-16T13:15:15+00:00
Paths:
Deleted  /trunk/madman/Rpacks/ENmix/DESCRIPTION
Commit made by the Bioconductor Git-SVN bridge.

Commit id: 38b795cf46fc1db7c28c0bdce556884ddca6a09e

    Delete DESCRIPTION

Revision: 102566
Author: c.beauparlant
Date: 2015-04-16T12:48:58+00:00
Paths:
Modified  /trunk/madman/Rpacks/ENCODExplorer/DESCRIPTION
Modified  /trunk/madman/Rpacks/ENCODExplorer/vignettes/DBmodel.Rmd
Modified  /trunk/madman/Rpacks/ENCODExplorer/vignettes/DataUpdate.Rmd
Modified  /trunk/madman/Rpacks/ENCODExplorer/vignettes/ENCODExplorer.Rmd
Commit made by the Bioconductor Git-SVN bridge.

Commit id: 0bcd9b622864943437b39513b24a13abc2eef3cb

    Corrected mistake in vignettes titles

    Signed-off-by: Charles Joly Beauparlant <Charles.Joly-Beauparlant@crchul.ulaval.ca>

Revision: 102565
Author: c.beauparlant
Date: 2015-04-16T12:42:27+00:00
Paths:
Added  /trunk/madman/Rpacks/ENCODExplorer/.gitignore
Modified  /trunk/madman/Rpacks/ENCODExplorer/DESCRIPTION
Deleted  /trunk/madman/Rpacks/ENCODExplorer/data/datalist
setting up git-svn bridge

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