Bioinformatics for High-throughput Sequencing
R / Bioconductor packages for high-throughput sequence analysis
Base Calling: methods, problems and alternatives
ShortRead for quality assessment and data manipulation
Visualisation tools for next-generation sequencing
Working with sequences and intervals
Metadata and Annotation with Bioconductor
Analysis of ChIP-seq data with R / Bioconductor
Short Read Alignment: extended usage
RNA sequencing